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Transductomics: sequencing-based detection and analysis of transduced DNA in pure cultures and microbial communities
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Dealing with Drought: Uncovering Sorghum’s Secrets
… Over 40 percent of the cereal crop’s genes respond to drought stress. The Science Fields of drooping stalks and cracked earth are becoming common images in many regions due to more extreme … This research was funded in part by DOE Grant DE-SC0014081 (to N.V., B.C., C.G., …
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Programs & Platform Leads
… As an Integrative Genome Science User Facility, the JGI plays a … genome science capabilities to support BER's mission of achieving a predictive understanding of complex … that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, …
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Webinar: MycoCosm Tutorial
… Learn more about JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics … Q: How exactly EcoGroups are built? A: EcoGroups are built based on what is known about the organism’s ecology, mostly … While are still working on finalizing the tree and related publication the tree is still in development and not …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… Researchers from the JGI recognized for their “significant influence in their chosen field or fields through the publication of multiple highly cited papers during the last … that identifies and classifies mobile genetic elements based upon their gene content and their genetic sequences. …
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Natural Prodcast Episode 19: Bill Fenical
… for you here today. We got the opportunity to talk to one of the real legends of natural products, Professor Bill Fenical from Scripps Institution of Oceanography in San Diego. Bill is a pioneer … really, all over the world. We used ships. We used land-based marine labs. We wrote cooperative grants with people …
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DAS Tool for Genome Reconstruction from Metagenomes
… Developing and validating an integrated approach to genome recovery … changes. Summary Researchers have been utilizing metagenomics as a way to study a collection of hard-to-culture microbes, but the efficacy of this … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office of Science …
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Learning to Look
… Machine learning approach significantly expands inovirus … “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters may be … a computer could use to conduct a similar type of search in microbial and metagenomic databases. In this case, the …
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16S rRNA Gene Amplicon Sequencing Data from Flooded Rice Paddy Mesocosms Treated with Different Silicon-Rich Soil Amendments
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A phylum-level phylogenetic classification of zygomycete fungi based on genome-scale data
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Coming-of-Age Characterization of Soil Viruses: A User’s Guide to Virus Isolation, Detection within Metagenomes, and Viromics
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Frequently Asked Questions: Proposal Submission
… See below for a list of Frequently Asked Questions about our proposal submission process. You can review successful letters of intent and submissions at the bottom of the page.  … Review the list of open calls ; click on the call link to see specific details including project types …
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