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… to identify over 27,000 microbial genes. The data from that study is now used across California State … of a course-based undergraduate resource experience. Hear from CSU San Marcos Professor Matt Escobar and UC Davis … of the JGI User Executive Committee, on how that study went from the lab to the classroom. …

… than 500 species of fungi. The Impact Interactions between plants and fungi run the gamut from mutually beneficial to antagonistic. In fungi, 5mC is … DNA modifications (epigenome).  In  Nature Ecology & Evolution , a team led by Robert Schmitz at the University …

Understanding how a fundamental mechanism of evolution allows microbes to adapt to changing environments. … and viral genomes, as well as genomes sampled all at once from the same environment, called metagenomes. Why? Simon … opportunity to study how DGRs work and develop more of them into new biological tools. … The work conducted by the U.S. …

… researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds in the … river health diagnostic systems to monitor for and identify land use or water quality changes. Summary Rivers are key … of watershed ecosystems, where rain or snow drain into such bodies of water before heading out to bays and …

… analyses, such as metabolic modeling, that go well beyond genome annotation and analysis. The JGI and KBase seek to … to seamlessly access and analyze data on scales ranging from single genes and individual genomes to metagenomes to systems-level modeling and …

… with the HudsonAlpha Institute for Biotechnology for our Plant Program, and is further leveraging the services of the … Genomics Institute for DNA and RNA extractions to support plant and other efforts. The JGI works closely with DOE …

… can adapt to future environmental conditions. Additionally, insights from the genome could help scale sustainable … protect other crops facing similar pathogens. Summary Many plants, sugarcane included, are polyploid and have multiple … effects of breeding practices that transformed sugarcane into production factories for sugar and biomass. …

What if we understood plants and how they adapt to their ever-changing … food, medicine, and bioenergy crops. But most available genomes are from narrow swaths of the plant tree of life. One project …