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Quorum-driven microbial consortium for Bioplastic production from agro-waste
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Katherine Louie
… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became … large metabolite databases by running 1000s of metabolite standards, and development of high-throughput untargeted … and custom software for integrating metabolomics with genomic data (MAGI) for functional annotation and …
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MISIP: a data standard for the reuse and reproducibility of any stable isotope probing-derived nucleic acid sequence and experiment
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… Puerto Nuevo is a small town along the Baja California coastline … student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first sampled the area in … be involved in venom activity, which is part of a larger consortium Ul-Hasan has started, known as the Initiative for …
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The microbial ecology of permafrost
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Prokaryote Program User Advisory Committee
… The Prokaryote Advisory Committee is chartered to offer advice, guidance and counsel on the effective management and strategic objectives of the microbial and metagenome programs and report back to them. … scientific relevance and quality. The Committee does not perform management functions nor does it direct the Programs' …
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Marine Microbe Contains Multitudes
… A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct groups with different lifestyles. The Science The bacterium SAR324 is unusually … by grants from the Simons Foundation (#329108 and #721223 to EFD) and Gordon and Betty Moore Foundation grant GBMF …
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MIxS-HCR: a MIxS extension defining a minimal information standard for sequence data from environments pertaining to hydrocarbon resources
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Taking Stock of the Known and Unknown Microbial Space
… Metagenomic datasets could help map out microbial diversity … decades, advancements in sequencing technologies have led to an abundance of microbial genomes becoming available to … the microbial diversity we know about, and proposes a path forward to curate and cultivate what is still unknown.  “We …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last … as other year-end science discovery lists.  Updates to the Genomic Encyclopedia of Bacteria and Archaea : Under the … also contributed as part of the study’s RNA Virus Discovery Consortium.  Grigoriev contributed to a cover article …
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JGI@25: Using Team Science to Build Communities Around Data
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … for an encyclopedia of reference genomes for fungal metagenomics. Two more CSP proposals came in 2016 that would … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …
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Genome Insider
… The Genome Insider podcast brings listeners into the science that the JGI makes possible. Each episode, … Wilhelm interviews researchers — JGI Users — and dives into their work on all kinds of organisms, from plants and fungi to microbes and viruses. Listen in to explore the data that …
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