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JGI-KBase Panel at SACNAS
… Nov. 2: Getting Credit for Scientific Contributions of Any Size What is …
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Evolution of a Fungal Gene Expression Regulator
… Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. The Science Changing an A, C, T or G in a genome sequence can lead to changes in protein structures … DNA modifications (epigenome).  In  Nature Ecology & Evolution , a team led by Robert Schmitz at the University …
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DAP-seq Drives Robust Mapping of Gene Regulation
… Multi-species assays yield an unprecedented view of plant evolution and adaptation.    Understanding how genes are … to technical limitations and the sheer complexity of plant genomes. Now, with improvements to DNA Affinity Purification … a single experiment — and integrated these data with single-cell gene expression maps. Together, the scale of data …
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Expanding Virophage Diversity
… Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant viruses. Virophages are small viruses … their discovery has extended the possible virophage genome size range from 13.8-29.3 kilobases (Kb) to 10.9-42.3 Kb. …
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User Executive Committee Charter
… the JGI user community and is responsible for providing input and advice on JGI policies and practices that … users and their science including technical capabilities offered, proposal review procedures, and the annual user … recommendations to the JGI regarding technical capabilities offered, including areas where more or less capacity is …
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Computationally Classifying Fungal Lifestyles
… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of … and biofuel production. Learning about the ecology and evolution of  Dothideomycetes could provide more insights … over 100  Dothideomycetes genomes, just enough of a sample size to test if a computer algorithm could distinguish …
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An Integrated Dataset to Understand Ecosystem Interaction
… data set will help identify how different elements of the ecosystem interact and respond to changes in the … within the trees. The data set generated is 25 terabytes in size. Resources for genomic sequencing, analysis and … were provided by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Artificial Polyploidy Improves Bacterial Single Cell Genome Recovery
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Decontamination of MDA Reagents for Single Cell Whole Genome Amplification
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Insights into the single cell draft genome of “Candidatus Achromatium palustre”
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Genomic sequencing of single microbial cells from environmental samples
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Mapping N-Linked Glycosylation Sites in the Secretome and Whole Cells of Aspergillus niger Using Hydrazide Chemistry and Mass Spectrometry
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