Search

… The Micro-Scale Applications group explores the genetic makeup of … that utilize microfluidics/microdroplet technology in order to enhance the quality of single-cell genomes and directly link functional information with individual cells. Research Team    … The JGI uniquely offers the first quantitative Stable Isotope Probing (SIP) Metagenomics …

… By leveraging new tools and large-scale data mining, JGI researchers nearly … fungal mitochondrial genome data, unlocking new potential for AI-driven studies of energy metabolism. The Science … The work conducted by the U.S. Department of Energy Joint Genome Institute …

… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes … 1) Review JGI sample QC requirements and protocols Obtaining DNA and RNA of … quantity and quality has been the rate-limiting step for many projects at the JGI. The quality of the starting …

…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of sequencing … products The JGI operates highly scaled short- and long-read sequencing pipelines. This includes advanced … An assay used for profiling transcription factor binding …

… Survey of Setaria's natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth (Toby) Kellogg and … United States, occasionally pulling over to the side of the road to collect small weedy plants and bring them … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …

… Find protocols provided by JGI and the JGI user community below for DNA preparation tools, high molecular-weight DNA extraction and RNA … Tips for High Molecular Weight DNA extraction: … RNA Extraction Protocols: … iTag protocols: …

… This webinar focused on how the JGI employs single-molecule, long-read … Input & sequencing Q(uestion): How much DNA is needed for “regular” vs the ultra-low input library creation … the PI. We currently use the ‘Base Modification Analysis’ tool within PacBio SMRT link, which works well for 6mA and …

… pick highlights from their summer experiences. This year the U.S. Department of Energy (DOE) Joint Genome … experiences and what they’ll take with them as they go forward in their careers.   Listed below are the interns, … ” Anna Kucherova : “I got to learn about skills and tools that I’d never done before from my mentors. Also, …

… Our lab is using mass spectrometry based metabolite profiling to provide direct biochemical datasets to improve our understanding … networks of environmental microbes and how they transform their environment. Research Team    … For further details, please reach out to the Group Lead …