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An analysis of codon bias in six red yeast species
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Single‐parent expression drives dynamic gene expression complementation in maize hybrids
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Comparative analysis of the transcriptomes of Populus trichocarpa and Arabidopsis thaliana suggests extensive evolution of gene expression regulation in angiosperms
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… chemical factories. They hold genetic blueprints for dozens of complex compounds, but stay largely dormant under … more efficient microbial factories. Identifying specific genes, regulatory elements and metabolic pathways that … concrete targets for optimization. Many of the metabolic switches identified are shared across hundreds of related …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a … of California and Oregon counties. It has been detected at scores of nurseries across the nation, elevating concerns …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. And at their base are … microbiomes that influence algal diversity and gene expression. Sailing from pole to pole on four research … to identify the microbes. And in order to determine what genes the algae were expressing, the team sequenced their …
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Assembly and seasonality of core phyllosphere microbiota on perennial biofuel crops
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The Joint Genome Institute Offers Resources Beyond a Core Facility
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Pinning Down a Piece of Photosynthesis
… By studying the structure and function of a cyanobacterial protein, … that photosynthesizers share. The end result was a list of genes, termed  The GreenCut2 Resource . It details 597 genes … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Tracing the Evolution of Shiitake Mushrooms
… New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get … molecule, lignin. Understanding Lentinula genomes and their evolution could provide strategies for converting plant … 1456588 to D.H. and DEB-1442113 to A.R., the Department of Energy award 0000238431 to D.H., the GENOBIOREF …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… have discovered that the candidate bioenergy feedstock switchgrass has adapted to expand its habitat range. But at … A collaborative team led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for … of the genome , which can have pronounced ecological and evolutionary consequences. A previous study conducted by our …
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Diversity, distribution, and expression of opsin genes in freshwater lakes
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