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Doubling Down on Known Protein Families
… novel computational approach, researchers confirm microbial diversity is wilder than ever. Imagine researchers exploring … with a flashlight, only able to clearly identify what falls within that single beam. When it comes to microbial … online Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach …
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Uncovering Novel Genomes from Earth’s Microbiomes
… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … genomes for just a small fraction of Earth’s microbial diversity. Because most microbes cannot be cultivated under … Biotechnology . Known as the GEM (Genomes from Earth’s Microbiomes) catalog, this work results from a collaboration …
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Taking Stock of the Known and Unknown Microbial Space
… Metagenomic datasets could help map out microbial diversity hotspots Over the past few decades, advancements … in sequencing technologies have led to an abundance of microbial genomes becoming available to the global … Dongying Wu, a member of the Functional Annotation team within the JGI’s Microbiome Data Science group. “Turns out …
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Genotype–phenotype correlations within the Geodermatophilaceae
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Predicted structural proteome of Sphagnum divinum and proteome-scale annotation
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Structure, function and diversity of the healthy human microbiome
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Wildfire-dependent changes in soil microbiome diversity and function
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Soil virus offers insight into maintaining microorganisms
… The work was enabled in part by a community data portal of the U.S. Department of Energy (DOE) Joint Genome … health. Summary Soil viruses are a reservoir of genetic diversity and capable of transferring genes from one host … tree was then constructed with the sequence data to compare viral chitosanases to others like it available in public …
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Defining the Sphagnum Core Microbiome across the North American Continent Reveals a Central Role for Diazotrophic Methanotrophs in the Nitrogen and Carbon Cycles of Boreal Peatland Ecosystems
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Game On: High School Students Drive Everglades Metagenomics Study
… In late June, Kathleen Lail, a member of JGI’s Sample Management Group, attended a conference in … They chose this location because much is unknown about the diversity of organisms (taxonomy) and particularly those in … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …
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Benchmarking viromics: an in silico evaluation of metagenome-enabled estimates of viral community composition and diversity
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Uncovering the Diversity and Activity of Methylotrophic Methanogens in Freshwater Wetland Soils
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