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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring polar bears in winter … the world, resulting in a five-fold increase of RNA virus diversity. “The world of viruses around us is vast, and we … view of virus diversity,” though not at the higher-level classifications of virus groups (phyla.) The new sequences …
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Doubling Down on Known Protein Families
… novel computational approach, researchers confirm microbial diversity is wilder than ever. Imagine researchers exploring … online Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach … and viruses, though 6 million of the sequences evaded classification. Researchers also tried to hone in on the …
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Global metagenomic survey reveals a new bacterial candidate phylum in geothermal springs
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A Sorghum Pangenome Opens More Doors to Discovery
… Leveraging decades of technological development, dozens of reference genomes … plant. In other lines around the world, much more genetic diversity exists.  Now, researchers have brought many … Development (USAID) also supported the work.   Publication:  Morris, G.P., Harder, A.M., Healey, A.L.  et …
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Deconvolute individual genomes from metagenome sequences through short read clustering
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The Source and Evolutionary History of a Microbial Contaminant Identified Through Soil Metagenomic Analysis
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Learning to Look
… Machine learning approach significantly expands inovirus diversity. To answer the question, “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters may be … are important from the standpoint of phage-bacterial coevolution and are also useful tools in CRISPR-Cas …
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BGC Atlas: a web resource for exploring the global chemical diversity encoded in bacterial genomes
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Natural Prodcast Episode 9: Roger Linington
… DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I talk to Roger … program, which stands for International Cooperative Biodiversity Groups, and it’s this great program funded by the … arc. And so, you know, definitely there has been a strong evolution in terms of the way the group thinks and that the …
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Simon Roux
… the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the … focused around developing foundational knowledge of viral diversity and virus-host interactions in microbial systems. … group at the JGI to further explore the ecological and evolutionary drivers of virus-host dynamics in soil …
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Natural Prodcast Episode 3: The Primer, Part 3
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … and another system. There should be. I mean, there’s some evolution that happened. But, you know, bacteria don’t leave … to be here and be able to discuss this incredible, natural diversity that we have at our fingertips. So I’m very …
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Uncovering the Diversity and Activity of Methylotrophic Methanogens in Freshwater Wetland Soils
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