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Salicylic acid activates poplar defense against the biotrophic rust fungus Melampsora larici‐populina via increased biosynthesis of catechin and proanthocyanidins
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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Kjiersten Fagnan
Division.. As a postdoc, her research focused on stable and accurate computational methods for reacting subsurface … … About the JGI Chief Informatics Officer … Selected Publications … Awards and Honors …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… was released to the public in a highly-cited 2006 publication in the journal Science . This provided a … them. Despite advances in the years since this landmark publication, SOD continued to sweep through dozens of … of the SOD Blitz Project. In hopes of controlling the spread of the disease, this effort has proven effective in …
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Exploring the limit of metazoan thermal tolerance via comparative proteomics: thermally induced changes in protein abundance by two hydrothermal vent polychaetes
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MetaBAT, an efficient tool for accurately reconstructing single genomes from complex microbial communities
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CRAGE-mediated insertion of fluorescent chromosomal markers for accurate and scalable measurement of co-culture dynamics in Escherichia coli
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SPRUCE-ing Up Science
… as his internship and investigations began.    Lawrence was paired with program co-founder and JGI mentor, Zhong Wang. … receive input during the internship, but it also helps to spread the science stories of JGI to a broader audience after … fine tune his approach. “I got a lot of that from Zhong.”   Publication: Carrell AA et al. Habitat-adapted microbial …
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Phytozome: Tutorial Workshop from 2022 CROPS Conference @HudsonAlpha
… of Energy Joint Genome Institute, and facilitates accurate and insightful comparative genomics studies. …
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Transposon Mutagenesis Paired with Deep Sequencing of Caulobacter crescentus under Uranium Stress Reveals Genes Essential for Detoxification and Stress Tolerance
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… microbes , scientists usually employ two different methods; shotgun metagenomic sequencing and single-cell sequencing. … methods for collecting genomes from microorganisms are shotgun (group) metagenomic sequencing and single-cell (individual) sequencing. Shotgun metagenomic sequencing takes much less time than its …
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