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Thousands of small, novel genes predicted in global phage genomes
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Webinar: MycoCosm Tutorial
… JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics data and comparative … A(nswer): Our focus is on fungi, algae, plants, and the microbial world but we also annotated several Phytophthora … While are still working on finalizing the tree and related publication the tree is still in development and not …
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Nikos Kyrpides
… Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the … BA in Biology, Aristotle University of Thessaloniki, Greece PhD in Molecular Biology and …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … metabolites for multiple applications. The planet’s microbial diversity is immense, yet much of it remains … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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Microbial Genomics & Metagenomics (MGM) Workshop
… Registration has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop on Microbial Genomics and Metagenomics. Details: …
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Single-cell enabled comparative genomics of a deep ocean SAR11 bathytype
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Prevalent genome streamlining and latitudinal divergence of planktonic bacteria in the surface ocean
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Metabolomics Technology Group
… Our lab is using mass spectrometry based metabolite profiling to provide … direct biochemical datasets to improve our understanding of microbial metabolism. Of particular interest is …
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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …
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New insights from uncultivated genomes of the global human gut microbiome
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A Sorghum Pangenome Opens More Doors to Discovery
… Leveraging decades of technological development, dozens of reference genomes and thousands of resequenced sorghum varieties, a … Development (USAID) also supported the work.   Publication:  Morris, G.P., Harder, A.M., Healey, A.L.  et … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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John Vogel
… years where he was a driving force behind the development of numerous genomic resources that fostered the widespread … techniques) and utilizing these resources to understand genome organization and regulation, abiotic stress tolerance, and the mechanisms by which plants …
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