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Jane Grimwood Named HudsonAlpha Genomics Chair
Congratulations to Jane Grimwood, who has been appointed the … large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 … of human chromosome 19 The DNA sequence and comparative analysis of human chromosome 5 The sequence and analysis of …
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User Programs
For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s … ONGOING Who Should Apply? Investigators with research projects that integrate the expertise and capabilities of …
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Expanding Virophage Diversity
Virophages are small viruses with double-stranded DNA genomes that … By mining more than 14,000 publicly available metagenomic datasets in JGI’s  Integrated Microbial Genomes & … including over 28,000 unique MCP sequences.  Further analysis led to the identification of 328 “high quality” …
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Plant-Microbial Interactions Group
Plants are complex organisms that harbor a fantastic diversity … atlas comprising Sorghum, Switchgrass, and Brachypodium datasets. We recently profiled the association between the … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …
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Micro-Scale Applications Group
The Micro-Scale Applications group explores the genetic makeup of … of single-cell genomes and directly link functional information with individual cells. Research Team    … The JGI … cutting-edge cell sorting, DNA amplification, and sequence analysis to recover the genomes of uncultivated microbes. We …
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IMG/M: a data management and analysis system for metagenomes
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Emiley Eloe-Fadrosh
Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research … research focuses on leveraging thousands of metagenomic datasets from host-associated and environmental samples to … Futures … Metagenome Science Program … Education … Selected Publications … Awards and Service …
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Jeremy Schmutz
Schmutz’s involvement with the DOE Joint Genome Institute dates back to 1997, when he was working for the Stanford … de novo plant assembly and the post-genome computational analysis at HudsonAlpha. … Jeremy Schmutz is the Plant … Award … Plant Science Program … Education … Selected Publications … Awards and Honors …
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Anoxygenic phototroph of the Chloroflexota uses a type I reaction centre
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Functional and genetic markers of niche partitioning among enigmatic members of the human oral microbiome
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Genomic Methods and Microbiological Technologies for Profiling Novel and Extreme Environments for the Extreme Microbiome Project (XMP).
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Game On: High School Students Drive Everglades Metagenomics Study
In late June, Kathleen Lail, a member of JGI’s Sample Management … through over 55 billion genes and 16 trillion DNA bases of data, to figure out what to study and compare for the … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …
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