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JGI Workshops at PAG
… the length and breadth of algal diversity, the numbers of sequenced algal genomes, and the quality of those genomes, … we will present current and ongoing developments at the JGI and KBase toward integrative biology and hear from researchers who are applying genomic sequence information to BER funded activities of plant systems. We will …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
In honor of the JGI's 25th anniversary in 2022, we have revisited a number … race was being waged. In this JGI@25 video, Susan Lucas, former JGI Production Department Head and current ESnet … Center, JGI staff worked around the clock to generate the sequences of these three chromosomes. In 2004, they …
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Synthetic Biology Informatics Group
Software engineers in the Synthetic Biology Informatics Group develop, deploy, and maintain software that support the JGI’s Synthetic Biology Program .  Representative software … tool BOOST , which provides a suite of tools to automate sequence design for assembly by Gibson, Yeast recombination …
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JGI@25: The Little Alga That Could
… to those who study it) a powerful reference organism for studying photosynthesis and cell motility. It’s also a … sustainable biofuel production. The JGI published a partial sequence of Chlamydomonas reinhardtii in 2003; then in 2007 … JGI’s early sequencing of C. reinhardtii became available, data mined by the JGI shows that those sequences have been …
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Introducing New Members of the JGI User Executive Committee
The JGI welcomes three new members to the JGI User Executive … of members. Each of the researchers had particular reasons for wanting to serve on the UEC. Hatzenpichler, who studies … in giving a voice to JGI users who feel that certain data sharing policies fail to represent the needs of large …
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JGI Scientists Pen Genome Watch Articles
Woyke and other JGI researchers made their debut writing for the Nature Reviews Microbiology column last year — and … Institute in the UK — a nonprofit that was founded to help sequence the human genome. Today, the Sanger Institute … metabolism . And postdoctoral researcher Sara Calhoun, data scientist Stephen Mondo, and  Fungal and Algal program …
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An Integrated Dataset to Understand Ecosystem Interaction
Research yields a comprehensive tree and soil dataset for understanding the dynamic relationship between … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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JGI Announces 2023 Community Science Program Awardees
… to the proposers of the 19 proposals selected for the 2023 Community Science Program call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … very excited to start working with this years’ crop of CSP recipients, over half of which are first-time PIs on a …
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Guidelines for public database submission of uncultivated virus genome sequences for taxonomic classification
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JGI Announces 2025 New Investigator Portfolio
Gilman, Louis Graf, Yuxi Guo, Shaomei He, Vayu Hill- Maini, Forrest Lefler, Pok Man (Bob) Leung and Huang Li; [middle] … Wisecaver, Yaqi You, Yong Zhang and Zhiping Zhong. (All images courtesy of the researchers) Each year, the JGI searches for novel research projects from PIs who have …
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JGI@25: Roots of a Mutualist Relationship
… and environmental challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was published in the journal … bicolor has a symbiotic relationship with poplar … Fungal Datasets … Genome Inside: THE Bioenergy Tree …
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JGI User Executive Committee Expands
… of the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Laboratory (Berkeley Lab). They are: Ivan Baxter of the Danforth Center, Sundy Maurice of the University of Oslo, Aaron … or improving bioinformatics tools that can help with dataset analysis, as well as how they can be shared with and …
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