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… Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the “chytrids”).  A collaborative team led by Joey Spatafora at Oregon State University, … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed …

… You can visit the Products & Offerings section of our website for more details, including a downloadable pdf of products categorized by Science Program.  … The majority of JGI projects come from the user community. Find out about … , and submit your proposal online using the Work Initiation Process (WIP) interface.    For commonly asked …

… Software engineers in the Synthetic Biology Informatics Group develop, deploy, and maintain software that support the JGI’s Synthetic Biology Program .  …

… Novel archaeal lineage found in Yellowstone may have been important in early Earth conditions. The Science Through a combination of sequencing tools and techniques applied to samples … team used metagenome assemblies, transcriptomes and single amplified genomes from samples collected from several …

… Dr. Yasuo Yoshikuni has been head of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the power of DNA synthesis, strain engineering, and biosystems … design for DOE-mission-relevant discovery and applications. This program has supported over 250 projects since …

… Through the JGI-UC Merced Genomics Internship, graduate students Candace Cole, Mo Kaze, Akshay Paropkari, … their work delivered during the 5th anniversary celebration of the internship program. Candace Cole, UC Merced JGI … My favorite thing is the mentorship provided by JGI. Everyone at JGI is so nice and helpful.”     Mo Kaze, UC Merced …

… annotation in fungal genomes. The Science In a proof-of-concept study, researchers demonstrated that a new … S. paradoxus at high temperatures (39°C/102°F). The Impact One of the challenges in understanding wild populations is … insertions of a foreign DNA sequence to generate a huge pool of mutants, each containing only a single copy of a …

… the JGI will move to a new login service, requiring the use of an ORCID account with two-factor authentication enabled to log in. Check our Help Site for additional … needed Users are notified as projects reach specific milestones, either by automated emails or emails from your Project …

… Over the course of the summer, the JGI-UC Merced Genomics Internship paired … before. Seeing the breadth of interesting work being done at the JGI has really motivated me to think outside of … my work. The experience has inspired me to incorporate powerful bioinformatic tools to my research interests during …

… Protein annotations provide insights into environmental tendencies The … and researchers more about the patterns and functions of environmental microbes. Researchers can use the tool to correlate protein annotations with ratios of DNA sequence fragments from the ecosystems. Selecting a …

… merrier,” with respect to their genomes. In their base state, they are diploids with two genome copies, one from each parent. Having three or more genome copies … plants; at least once during their evolution, the genomes of flowering plants multiply. Over time, plants lose many …

… in sequences affect traits. In a text file, the rows of letters A, T, C and G appearing over and over in a … Lawrence Berkeley National Laboratory (Berkeley Lab). And one of the tools that researchers can apply to study the … the transcription factor proteins from a DNA template amplified directly from either genomic DNA or complementary …