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JGI-TMF Critical Minerals and Materials Call
… call represents a unique opportunity for researchers to request the capabilities and expertise of both the Joint … program seeks research proposals that integrate genomics with nanoscale science, accelerating discoveries and … metabolomics and analysis will be provided for free to the PI by the Department of Energy’s funding of the JGI. …
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FICUS-NERSC/KBASE
… The mission of the Joint Genome Institute is to serve the scientific community as a user facility pioneering functional genomics to solve the most relevant bioenergy and environmental … Energy Research Scientific Computing Center ( NERSC ) is to accelerate scientific discovery at the DOE Office of …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… Earth’s climate. Most methane is produced in environments without oxygen through a process called methanogenesis. … of significant interest for their potential contributions to a sustainable bioeconomy, including, potentially, methane … to make the methane, so to speak. These organisms basically need two enzymes.” These microbes are specialized to use …
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JGI@25: The Little Alga That Could
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … challenges. Chlamydomonas is a single-celled alga with a unique place in evolutionary history. Retaining … the manual curation of the Chlamydomonas genes. The need for streamlining those gene names speaks to the impact …
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Crysten Blaby-Haas
… Science in 2011 from the University of Florida, working with Valérie de Crécy-Lagard on using comparative genomics to predict gene function in bacteria and leveraging molecular biology and reverse genetics to test those hypotheses. From 2011 – 2015, she worked with …
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Webinar: PhycoCosm Tutorial
… algal genomes, omics data and comparative analysis tools. Questions and Answers 1.  Q(uestion): Why would your … A(nswer): If you find that our trees are incorrect or need to be changed, please contact us and we’ll work work it … not sequenced by JGI, if PIs are interested are working with us please contact me at [email protected] 5.  Q: If …
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Evolution of a Fungal Gene Expression Regulator
… Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. … considered for bioenergy feedstock development. Summary With the aim of producing at least one reference genome for … kingdom. The abundance of fungal genomes underscores the need for a more comprehensive exploration of genomic DNA …
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Pinning Down a Piece of Photosynthesis
… a cyanobacterial protein, researchers have new insights into how these ocean photosynthesizers cycle carbon in … are tiny, invisible to even the most powerful light microscope, and fickle, often hiding their function from even the … studied, that sandwich has an additional outer layer — two zinc ions, a component they’ve named a zinc-mirror heme …
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Scaling Up Existing Skill Sets
… Merced Genomics Internship paired six UC Merced students with seven JGI researchers for bioinformatics internship … in fields ranging from plant-microbe interactions to functional genomics. Hear from five of the Summer 2019 … 4th year PhD student in Quantitative and Systems Biology Mentor: Guohong Wu, Plant Comparative Analysis What effect has …
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Mircea Podar
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Cultivating Symbiotic Antarctic Microbes
… employed multiple microbiology and ‘omics techniques to experimentally determine that Nanohaloarchaeota are … of soil-sediment environments, water and air-atmosphere with the humans and the biosphere), including the global … insights about how microbes have adapted to thrive in polar ecosystems. The work by Cavicchioli’s team sheds light …
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Single Cell Research Group
… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of … candidate phyla, major branches in the phylogenetic tree without cultivated representatives. The “Great Plate-Count … genomes in the public domain, the bulk of which belong to only three phyla. The Woyke group uses single-cell …
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