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Community Science Program
… sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  … fall under the umbrella of our CSP: The Large Scale call is for expansive projects that leverage a range of JGI … requires a Letter of Intent. The New Investigator call is for PIs who have never led a JGI project, and the Functional …
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Porphyra (Bangiophyceae) Transcriptomes Provide Insights Into Red Algal Development And Metabolism
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The biogeographic differentiation of algal microbiomes in the upper ocean from pole to pole
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A multi-omic characterization of temperature stress in a halotolerant Scenedesmus strain for algal biotechnology
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Multiple origins, one evolutionary trajectory: gradual evolution characterizes distinct lineages of allotetraploid Brachypodium.
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
Across four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal … function. If a tree falls in the forest — whether or not anyone registers the sound — one thing is for sure: there are …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… are abundant and yet exceptionally small, with mini genomes to match. As a result, they cannot process all of … how these hosts and hitchhikers coexist is key for understanding their impact on wider ecosystems, but … it to usable organic compounds. However, no microbe works alone. Archaea, bacteria, and viruses all operate in concert …
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Metabolomics
… of new molecules and pathways. The JGI Metabolomics Platform delivers rich metabolite profiles from diverse … products At JGI, in-depth molecular profiles are generated for metabolites extracted from a variety of experimental … metabolites are identified using LC-MS/MS methods optimized for specific types of molecules.   … Find more details on …
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Uncovering Novel Genomes from Earth’s Microbiomes
… leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple applications.   … methods in the past decade, researchers have uncovered genomes for just a small fraction of Earth’s microbial … To acknowledge the efforts of the investigators who had done the sampling, Eloe-Fadrosh reached out to more than 200 …
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Partnerships Development Team
… high-throughput sequencing and other resources at the JGI for projects of relevance to Department of Energy missions. … enable research jointly sponsored by the Berkeley Lab and one or more partners for shared benefit. Industry partners … the Department of Energy announced the  2020 TCF projects . One of them supports a project between JGI and LanzaTech, a …
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Updating algal evolutionary relationships through plastid genome sequencing: did alveolate plastids emerge through endosymbiosis of an ochrophyte?
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Protocols
… protocols provided by JGI and the JGI user community below for DNA preparation tools, high molecular-weight DNA … can be found here . DNA Extraction Protocols: … Tips for High Molecular Weight DNA extraction: … RNA Extraction …
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