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Improving the Cacao Genome and Phytozome
… will be cocoa for chocolate tomorrow In 2010, a draft first genome of  Theobroma cacao  – the tree that produces cacao … released by a Mars, Inc.-led consortium through the Cacao Genome Database project. The genome sequence was assembled by the plant team at the  …
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Tanja Woyke
… Woyke pursued her postdoctoral research at the DOE Joint Genome Institute in 2004. The main object of her research … primary interest and passion. Dr. Woyke stepped into the Microbial Genomics Program Lead position in 2009 and assumed … Tanja Woyke is the Microbial Science Program Head as well as our Deputy of User …
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Help from Citrus’ Bitter, Hardier Cousin
… The chromosome-scale genome sequence of trifoliate orange yields clues to … leaves, a team of researchers sequenced  P. trifoliata ’s genome. Scientists at the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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A Horizontal Gene Transfer Event Defines Two Distinct Groups within Burkholderia pseudomallei That Have Dissimilar Geographic Distributions▿ †
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JGI & KBase at PAG XXVII
… The Plant and Animal Genome XXVII Conference (PAG) takes place January 12-16, … in San Diego, Calif. Representatives from the DOE Joint Genome Institute (JGI) and the  DOE Systems Biology … head Jeremy Schmutz and  KBase Co-PI Bob Cottingham host a  workshop on DOE Biological and Environmental Research (BER) …
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The Fast Changing Landscape of Sequencing Technologies and Their Impact on Microbial Genome Assemblies and Annotation
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JGI announces 2024 Functional Genomics awardees
… and omics capabilities to enhance understanding of gene and genome function. Tapping into these functions allows …
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Defining a Pan-Genome for Antarctic Archaea
… Analysis of haloarchaeal metagenomes broadens understanding of Antarctic biogeography. … adapt from marine to hypersaline conditions by studying the microbial communities in Antarctic lakes, some of which have … content that was likely acquired due to gene transfer events. Such events can occur in response to viral …
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A Model System for Perennial Grasses
… Panicum hallii genomes offer insights to drought tolerance. The Science … hallii (Hall’s panicgrass), by generating two complete genomes from varieties that diverged over a million years … Rising global temperatures are causing extreme weather events, ranging from prolonged droughts to extended periods …
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Open Frameworks Training the Next Generation of Scientists
… sequencing services and analysis—to participants. Over the past two years, Myco-Ed has been used in 15 individual … involving academic faculty and researchers at the DOE Joint Genome Institute (JGI), a DOE Office of Science User … Myco-Ed: MICROnet. MICROnet facilitates train-the-trainers workshops to connect educators and empower them to utilize …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… Analysis reveals the microbial community involved in a bioremediation effort. The … break down PCE into the chemical compound ethene. Applying genome sequencing and analysis, the researchers identified other bacteria and microbial processes that support PCE biodegradation. The …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… Biotechnology and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Berkeley National Laboratory (Berkeley Lab), generated genome sequences for nearly 600 green millet plants and … efficient at photosynthesis, a concern as extreme weather events become more frequent. “A big part of the Danforth …
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