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This summer, the DOE JGI hosted 10 interns who came from a wide range of … some computational analyses at their desks. As part of the DOE JGI’s efforts to promote diversity and inclusion in the … out photos of the interns. For this second year of the DOE JGI/University of California, Merced Genomics …

… with the HudsonAlpha Institute for Biotechnology for our Plant Program, and is further leveraging the services of … support plant and other efforts. The JGI works closely with DOE computational facilities (e.g., the National Energy … Scientific Computing Center (NERSC) and data infrastructure projects—the DOE Systems Biology Knowledgebase (KBase) and …

… be the first publicly available, river-focused microbial resource that provides information at multiple scales from … over 1,000 metagenomes and established standardized sequencing protocols so that researchers could compare … river microbiome datasets are also available through the DOE Systems Biology Knowledgebase, allowing researchers to …

Laboratory (EMSL) co-hosted a JGI Engagement: Accessing Resources at Multiple DOE User Facilities with a Single Proposal webinar, inviting … single cell capabilities range from traditional single cell sequencing and mini-metagenomics to more targeted …

Mr. Schmutz’s involvement with the DOE Joint Genome Institute dates back to 1997, when he was … by the DOE Joint Genome Institute and the collaborative projects funded through the CSP program. In addition to … 2023. JGI plant gene atlas: an updateable transcriptome resource to improve functional gene descriptions across the …

… metabolic properties encoded within those genomes. Our aim is to more fully capture microbial and viral … Clum, A. et al. (2021)  DOE JGI metagenome workflow …

… across 90 species. “One unique thing about this work was our focus on all the kingdoms, including animals, plants, … Wisconsin-Madison as well as the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Berkeley Lab. …

… and Environment (INRAE) and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … and enabling future metagenomics studies.   … The sequencing project was funded by the U.S. Department of … roots: friends, enemies or frenemies? … Datasets … From our partners … Behind the Paper …

… of Energy's Computational Science Graduate Fellowship (DOE CSGF) program was developed to meet the Nation's growing … with advanced computer skills. During the summer of 2016,  DOE CGSF recipient Adam Riesselman of Harvard University worked with DOE JGI's Sam Deutsch. Learn more about the DOE …

Our lab is using mass spectrometry based metabolite … profiling to provide direct biochemical datasets to improve our understanding of microbial metabolism. Of particular …

… … Find more details on the instrumentation we use and our methodology for metabolite analyses.  … Read more about our submission guidelines, what you can expect from your results as well as our library standards. … Metabolite …