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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… the JGI DNA Synthesis Science Program, which started in 2012, and what they’ve discovered through their … collaboration has been incredibly productive; more than 10 papers, including two Nature Plants publications, in five …
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UC Merced Interns Reflect on Their JGI Summer Projects
… Over the course of eight weeks this past summer, 10 students from UC Merced worked closely with JGI … participated in this internship remotely due to COVID-19 restrictions, but virtual events and technology enabled a …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… a DOE Office of Science User Facility. This year, the 12th JGI-UC Merced cohort consisted of three undergraduate … students and eight graduate students, hosted by 18 JGI staff. One of the mentors, postdoc Yumary Vasquez, …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… dead cells recorded. Samples were taken again at two, six, 12 and 24 hours. By the 24-hour mark, these algae showed … Alliance of Canada-Compute Canada facilities. The work (10.46936/10.25585/60001017) conducted by the U.S. Department … U.S. Department of Energy under Contract No. DE-AC02-05CH11231. …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… JGI was established to work on the Human Genome Project in 1997. She was a group lead at Stanford Human Genome Center … publications that Grimwood contributed to include: A 2021 Nature paper announcing a high-quality reference sequence … sequence and analysis of duplication-rich human chromosome 16   …
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Microbiome Data Science Team
… global diversity of alternative genetic codes (Science 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science 2017, Nature Microbiology 2018), discovery of … Reveal Thousands of Small, Novel Genes. Cell 178(5):1245-1259 Nayfach S, et al, (2019) New insights from …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… for the next five years. It also includes more than 130 implementation milestones to help track and drive … path, has previously proven successful; in the 2018-2023 five-year strategic plan, the JGI accomplished 90% …
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Expanding Virophage Diversity
… the number of known high quality virophage genome sequences 10-fold through computational approaches. By mining more … the gene counts have similarly gone up from 13-25 to 12-39. “Overall,” the team concluded, “we provide a global …
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Frederik Schulz
… Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading the New Lineages of Life Group. His … metagenomics. Nature Reviews Microbiology 20: 721 Volland, J.-M. et al. 2022. A centimeter-long bacterium at the interface of simple and complex life. Science . 376: 1453-1458 Nayfach et al. (2021) A genomic catalog of Earth’s …
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The Expanding Universe of Methane Metabolisms in Archaea
… metabolisms is “vastly underestimated.” In the March 4, 2019, issue of Nature Microbiology , they mined the Integrated … by the other study co-authors, and reconstructed from these 10 metagenome-assembled genomes (MAGs) representing new … Marker genes for diverse methane metabolisms Of the 10 MAGs reconstructed in the study, five were from …
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DOE JGI Interns Share Their Summer Experiences
… This summer, the DOE JGI hosted 10 interns who came from a wide range of backgrounds. Many … briefly about their time at the JGI at http://bit.ly/JGI15summerinternsvids . Click here to check out photos of the …
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