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JGI@25: Solving the Mystery of the Missing Oil
In honor of the JGI's 25th anniversary in 2022, we have … his team tracked the thousands of bacterial and archaeal species using a DNA-based array developed at Berkeley Lab. … also helped track and characterize the shifting waves of microbial communities involved in removing different …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
Journal publication caps JGI pilot project with fledgling Florida high school scientists. The Florida Everglades … the latest molecular techniques to learn more about the microbial communities in the Arthur R. Marshall Loxahatchee … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Natural Prodcast Episode 17: Cassandra Quave
… of infectious or inflammatory disease and these same species are being used not just by one generation but by … but looking actually at powders. And we’ve had some promising preliminary data where we’ve done this. If you think … that we found, indeed, that both formulations had some antimicrobial properties. But the one that was used in …
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Large‐scale cultivation of the bumblebee gut microbiota reveals an underestimated bacterial species diversity capable of pathogen inhibition
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Synthetic Biology Lab
The Synthetic Biology lab is divided into a DNA synthesis production group and a synthetic … DNA synthesis and assembly group: Our production group operates as user facility that aims to provide access to … to the broader community.  We focus our efforts on integrating database mining and sequence design with scaling …
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Igor Grigoriev
Dr. Grigoriev joined the DOE Joint Genome Institute in 2003, following his … National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of California, Berkeley. He … Haitjema et al (2017) A parts list for fungal cellulosomes revealed by comparative genomics.  Nature Microbio 2:17087. …
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Evolution and comparative genomics of the most common Trichoderma species
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Green Algae Reveal One mRNA Encodes Many Proteins
Gene expression in eukaryotes was long held to be monocistronic – that is, a … genes are encoded on a single molecule of mRNA – in two species of green algae, Chlamydomonas reinhardtii and … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Anoxic carbon flux in photosynthetic microbial mats as revealed by metatranscriptomics
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Decoding Yellowstone’s Microbial Mats
… it wouldn’t exist without cyanobacteria; they began oxygenating Earth over two billion years ago. A team of researchers … Park to study how cyanobacteria are living, communally, in microbial mats. Along the way, they’ve encountered … new technologies, and made a few discoveries about the microbial mat denizens.  …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… for every family of fungi. In the following guest piece, JGI user Ying Chang in the Spatafora lab describes … weakly. Further investigation on the source of controversy revealed that the branches among Olpidium and the first few … known fossil record of land plants and evolved in early microbial biocrust environments.     … The U.S. Department …
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IMG ER: a system for microbial genome annotation expert review and curation
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