Results

RegTransBase – a database of regulatory sequences and interactions based on literature: a resource for investigating transcriptional regulation in prokaryotes
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The secondary metabolism collaboratory: a database and web discussion portal for secondary metabolite biosynthetic gene clusters
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ATGC: a database of orthologous genes from closely related prokaryotic genomes and a research platform for microevolution of prokaryotes
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Conifer DBMagic: a database housing multiple de novo transcriptome assemblies for 12 diverse conifer species
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… within the Integrated Microbial Genomes and Microbiomes (IMG/M) platform — has been developed to help inform … and metabolic roles across global metagenomes (within IMG).  The Impact The initial analysis highlights abundances … specific genomic signatures that could be used to hypothesize environmental conditions.  The team plans to monitor …
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iPHoP: A Matchmaker for Phages and their Hosts
… helps fill in what cultivation can’t. The Science At first, viruses are merely toolkits. To do anything, they must find … Applied to 216,015 high-quality virus sequences in the IMG/VR database, the iPHoP program generated many new …
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Development of an integrated transcript sequence database and a gene expression atlas for gene discovery and analysis in switchgrass (Panicum virgatum L.)
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The Genomes OnLine Database (GOLD) v.5: a metadata management system based on a four level (meta)genome project classification
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Construction of a medicinal leech transcriptome database and its application to the identification of leech homologs of neural and innate immune genes
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At the Forefront of Terrestrial Virus Research
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Nikos Kyrpides
… analysis platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics Program head in 2010 and … S, et al. (2021) Metagenomic compendium of 189,680 DNA viruses from the human gut microbiome. Nat Microbiol . … Nature . 578:432-436 Roux S. et al. 2019. Cryptic inoviruses are pervasive in bacteria and archaea across Earth’s …
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JGI on the 2021 Highly Cited Researchers List
… aspects of the Integrated Microbial Genomes & Microbiomes (IMG/M) Nikos Kyrpides was part of an international research … global cities. He and his colleagues used an extensive JGI database to investigate viruses detected in the samples. Simon Roux co-organized the …
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