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High‐throughput identification of novel heat tolerance genes via genome‐wide pooled mutant screens in the model green alga Chlamydomonas reinhardtii
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Cataloging the Microbes that Manage the Health of River Systems
… Database provides details on river microbes in 90% of US continental watersheds. The … are also available through the DOE Systems Biology Knowledgebase, allowing researchers to immediately explore and … anything. The collaborative consortium behind the GROWdb project demonstrates not only how researchers can …
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First Monoploid Reference Sequence of Sugarcane
… Most species are diploids and have two sets of chromosomes, one from each parent. In contrast, many crops have multiple sets of chromosomes (they … The JGI sequenced half of the 4,500 BACs sequenced for this project that were colinear to the gene-rich part of sorghum …
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Four Researchers Join JGI User Executive Committee
… of Energy user facility located at Lawrence Berkeley National Laboratory. Holly Bik of the University of Georgia, … Program over the past decade in gene regulatory network projects supported by the CSP, and as part of microbiome … of the Genomic Encyclopedia of Bacteria and Archaea (GEBA) project. As a UEC member, he aims to help the JGI …
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Natural Prodcast Episode 14: Nigel Mouncey
… DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . … And a little after that acquisition, I moved to another project. This time on vitamin C with a Gluconibacter .  And … to JGI?  NIGEL MOUNCEY: Yes, I’d got to this point in my career where I was spending probably a bit more time with …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … as part of Genomic Encyclopedia of Bacteria and Archaea (GEBA) initiative. “This project has helped to define the current shape of the … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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FICUS Overview
… The Facilities Integrating Collaborations for User Science (FICUS) initiative was established in … and multidisciplinary nature of DOE mission science projects, this initiative aims to encourage innovative … and selection processes, making it difficult to propose projects that truly integrated the capabilities of more than …
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An Integrated Dataset to Understand Ecosystem Interaction
… tree and soil dataset for understanding the dynamic relationship between poplar trees and their microbial partners. … they are, a recent data set  outlined in  Scientific Data connects molecular features to large ecosystem-level … By collecting data from 27 different poplar ( Populus trichocarpa ) trees, as well as the soil surrounding their roots …
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Natural Prodcast Episode 2: The Primer, Part 2
… Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hi, again. This is Dan, and you’re … But… DAN: Yeah, there are a lot of ways to put together carbon molecules. Chemistry is pretty limitless. All right, … in partnering with us, we want to hear from you! We have projects in genome sequencing, DNA synthesis, …
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How Microbes Can Protect Plants in Drier Straits
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Natural Prodcast Episode 7: Ben Shen
… Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hello, and welcome back for Episode … meeting on natural products, but as a new, I call it “incarnation”, for this series of meetings. It’s because – … benefits. DAN: Now, you and I are working together on a project at the JGI to try to find new enediyne clusters and …
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Mission
… JGI Mission As a U.S. Department of Energy Office of Science user … genomic capabilities, large-scale AI-ready data and professional expertise to support the global research community in studies of complex biological and environmental systems. We optimize our service to the community …
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