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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… technology has changed dramatically over the last  25-plus years since the JGI’s inception, making it possible for … the JGI produced 33 billion base pairs of sequence; by 2023, that number was almost 717 trillion. Last year, the …   ( Subscribe to Genome Insider on  Apple Podcasts ,  Spotify or wherever you get your podcasts) Microbial ecologist …
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Industry Engagement Program
… Mouncey joined the JGI in 2017, he brought with him 20 years of industry experience — and an opportunity to expand … User Facilities — as well as their resources. It will identify high-value partnerships among members that catalyze data …
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A More Intuitive Phytozome Interface
… genomes and has been under active development for over 5 years, provides users with the genome browsers, gene pages, search, BLAST and BioMart data warehouse interfaces … restoration. They include Jalview (for viewing and modifying multiple sequence alignments). Variation view on …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… This year’s list features 6,900 researchers working in 21 fields.  Congratulations to … rank in the top 1% by citations for field and publication year are: Igor Grigoriev (Cross-field)  Marcel Huntemann …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… Institute, a DOE Office of Science User Facility. This year, the 12th JGI-UC Merced cohort consisted of three …
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Progress Reports: 2002–2020
… FY20 Progress Report … FY19 Progress Report … FY18 Progress Report … FY17 Progress Report … FY16 Progress Report … FY15 Progress Report … FY14 Progress Report … FY13 Progress Report … FY12 Progress Report … FY11 Progress Report … FY10 Progress Report … FY09 Progress Report … FY08 Progress Report …
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Glacier ice archives nearly 15,000-year-old microbes and phages
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JGI Mural
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Introducing New Members of the JGI User Executive Committee
… been an active user of the JGI at any time in the past two fiscal years is eligible for election to the UEC. Members serve three-year terms and can serve no more than two consecutive terms. …
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Scaling Up Existing Skill Sets
… shared their experiences below. Name: Noelle Anderson Class Year: At the time of the internship, 4th year PhD student in Quantitative and Systems Biology Mentor: … even know existed before. Name: Deepika Gunasekaran Class Year: 2nd year graduate student in Quantitative and Systems …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship … 2014 has grown to a total of 75 with the inclusion of the 2023 cohort. Each of them has brought invaluable insights, … and beyond. Before breaking for the poster session of the 2023 intern cohort, representative mentors and alumni shared …
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Plant Microbial Interactions Group
… system. We seek to expand beyond this model system by identifying phages and characterizing this multipartite phenomenon … 10.1038/s41579-020-0381-4 10.1038/s41396-020-0637-z 10.1038/s41477-024-01666-3 10.1016/j.celrep.2023.112676 10.1016/j.devcel.2022.01.008 …
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