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The 1KFG project represents affiliations at over 180 organizations in 29 U.S. states and 35 countries. … for fungal metagenomics. Two more CSP proposals came in 2016 that would complement these initial efforts: Spatafora … has “significantly advanced our understanding of 1 billion years of evolution in Kingdom Fungi — from phylogenetic …

… applying a method that allows researchers to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo … precise genome editing. This means that scientists can modify gene expression, or delete genes, all with the rapid …

… returned to re-engage with their mentors from the previous year and continue working on their research project! The …

DOE user facilities EMSL and JGI announce FY 2020 collaborative FICUS projects. Through the Facilities …

DNA synthesis and metabolomics capabilities to identify, express and characterize bioactive secondary metabolite … Identification by in vitro-sequencing (RIViT-seq) to identify RNA polymerase-sigma factor targets, and have expanded … Report Card toolkit (HERC-tk) to enable users to identify the best host to express their BGC(s). This is based on …

… been an active user of the JGI at any time in the past two fiscal years is eligible for election to the UEC. Members serve … and career stages. The election period concluded on January 8, 2024. …

… approach for isolating individual bacterial cells and amplifying their genetic material, thus bypassing the need to … arbuscular mycorrhizal symbiosis. Nature Plants 10, 673–688 Vyshenska et al. 2023. A standardized quantitative … viruses. Nature Comm . 9 (1), 4881 Tsementzi, D. et al. 2016. SAR11 bacteria linked to ocean anoxia and nitrogen …

… uncultured in laboratories. Other firsts followed. The next year, the JGI team reported the first closed and finished … deep-sea, oil-eating bacterium from a single cell. Several years later, the continuing single cell sequencing … JGI’s single cell genomics capabilities to assemble, identify, and characterize more than 200 microbial genomes that …

… these different routes. To train the model, the team used 1,870 known virus-host pairs to generate a matrix of data …

… metagenomic sequencing and single-cell sequencing. For years, extracting single cells and then amplifying their DNA for genome sequencing was no easy task. The … Amplification (PTA) yields a much higher completion, above 80% in most cases. The Impact PTA is a refined capability …