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Multilevel analysis between Physcomitrium patens and Mortierellaceae endophytes explores potential long‐standing interaction among land plants and fungi
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JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad
… and viruses within microbial genomes. As mobile genetic elements like viruses spread their DNA, they can affect how …
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Natural Prodcast Episode 15: Katherine Duncan
… people that wants to study oceanography and was fascinated by the oceans, though I’ve always lived by the sea in the northeast of Scotland. It was actually … ActinoBase. It’s not the PIs. It’s them that do it. They created the Wiki. They edit the pages. They add the content. …
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Partnerships: Adopt-A-Genome
… of the claimed genome sequences. This opportunity, provided by the Department of Energy Joint Genome Institute, builds … thousands of microbial genomes that have been sequenced by the JGI though not formally analyzed or published.  The … analysis. IMG/M user interface is designed for use by microbiologists to quickly bridge the gap from sequence …
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Experimenting with EcoFABs for Student Labs - Jill Bouchard & Ying Wang
… plants and microbes, Trent Northen’s group at Berkeley Lab created a fabricated ecosystem – an EcoFAB. These small …
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Exploring the limit of metazoan thermal tolerance via comparative proteomics: thermally induced changes in protein abundance by two hydrothermal vent polychaetes
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CSP New Investigator Call
… synthesis, metabolomics and analysis will be paid for by the Department of Energy’s funding of the JGI. There is … merit, DOE mission relevance , proposed data usage by the applicant/community, and track record of the …
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User Support
… your Project Manager will facilitate project execution by: Metadata verification and coordination with IMG , GOLD … are notified as projects reach specific milestones, either by automated emails or emails from your Project Manager. … monitor the status of your sequencing project at any time by logging on to the Genome Portals using your JGI login. …
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Exploring Proteomes of Robust Yarrowia lipolytica Isolates Cultivated in Biomass Hydrolysate Reveals Key Processes Impacting Mixed Sugar Utilization, Lipid Accumulation, and Degradation
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Natural Prodcast Episode 20: Brian Bachmann
… just– and then in terms of there’s sequencing an organism by shotgun, which is what we did, we didn’t even sequence … find gene clusters in cosmid libraries and sequence those by shotgun. We had a dozen people doing that to get that one … and using the terminal selection as a step. So it was just by retrosynthesis. And that’s what I really wanted to do. …
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Natural Prodcast Episode 1: The Primer, Part 1
… search away! If you like these primer episodes, let me know by emailing us to [email protected], or on twitter @JGI or … interacting in the environment like, like my journey into exploring that world, I did feel like there are there is a … smell is a chemical compound called geosmin that’s produced by soil bacteria that live all over the place. So that smell …
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
… mechanistic studies.  This conference is inspired by the vision of standardized fabricated ecosystems … science. Organizers The EcoFAB 2025 Conference is organized by the EcoFAB Steering Committee, dedicated to advancing …
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