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JGI Portals
… Download plant, algal, fungal and microbial genomes and metagenomes — top-quality … fungi. Mycocosm enables users to navigate across sequenced fungal genomes, and to conduct comparative and …
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Optofluidic Raman-activated cell sorting for targeted genome retrieval or cultivation of microbial cells with specific functions
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Mapping Heat Resistance in Yeasts
… A new approach for improving functional annotation in fungal genomes. The Science In a proof-of-concept study, … S. paradoxus at high temperatures (39°C/102°F). The Impact One of the challenges in understanding wild populations is … far-flung species would speed up efforts to harness species diversity in traits relevant to U.S. Department of Energy …
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Introducing New Members of the JGI User Executive Committee
… to help develop the JGI’s community outreach efforts with diversity, equity and inclusion in mind. Microbiome … collaborators and other scientific organizations. Fungal biologist Stajich from UC Riverside sees the JGI’s … investigator who has been an active user of the JGI at any time in the past two fiscal years is eligible for election …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … to terrestrial habitats. The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic … some terrestrial fungal lineages for an extended period of time, which would be rather intriguing given the lack of …
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Multiple origins, one evolutionary trajectory: gradual evolution characterizes distinct lineages of allotetraploid Brachypodium.
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Leo Baumgart
… to characterize gene regulation at the level of individual cells across diverse plant tissues. Dr. Baumgart focuses on expanding functional genomics capabilities through process … BS in Biochemistry and Cell Biology, University of California, San Diego PhD in …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… family of enzymes is critical to the synthesis and broad diversity of terpenes. Until recently, studies of the TPS … annotation of two C. citriodora subspecies provides an excellent opportunity to investigate the conservation and … in clusters or duplicate arrays, these genes are prone to rapid genetic expansion which partially explains the …
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User Programs
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Sequencing the fungal tree of life
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Genome analysis and description of Tunturibacter gen. nov. expands the diversity of Terriglobia in tundra soils
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Crysten Blaby-Haas
… and engineering. She earned her PhD in Microbiology and Cell Science in 2011 from the University of Florida, working … Service Award (NRSA) Individual Postdoctoral Fellow, expanding her experimental repertoire to include in vitro … PhD, Microbiology and Cell Science, University of Florida NIH Postdoctoral …
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