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DOE Metrics
FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal … counted once, even though an individual may have several projects/roles. Sequencing Quarter Total Bases (Trillions) … counted once, even though an individual may have several projects/roles. Sequencing Quarter Total Bases (Trillions) …
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Mapping the microbiome milieu
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The emergence of microbiome centres
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Nikos Kyrpides
Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the … National Laboratory. Dr. Kyrpides’ research focus on Microbiome Research with an emphasis on Microbiome Data … Nayfach S, et al. (2021) A genomic catalog of Earth’s microbiomes. Nature Biotechnol . 39(4):499-509 Danko …
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Plant-Microbial Interactions Group
… fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial … terrestrial world. Research Team    … Plant microbiomes hold the amazing ability to influence plant …
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The Biota Project: A Case Study of a Multimedia, Grassroots Approach to Scientific Communication for Engaging Diverse Audiences.
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Plotting a Model for Virus-Host Warfare Deep Below Ground
…   Visualizing a novel, candidate viral genome found in the deep … carbon-fixing microbes and targets of multiple viruses in Earth’s deep subsurface. They are abundant representatives … (Nachwuchs-gruppe “Dr. Alexander Probst”), and the NOVAC project of the German Science Foundation (grant number DFG …
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A framework for human microbiome research
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Getting to the core of the gut microbiome
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Applying Viral Genomics Expertise to Understanding the Human Virome
… hub for NIH program. While the microbes in, on and around Earth outnumber the stars in the Milky Way, viruses … Laboratory, have collaborated with global researchers on projects related to understanding how the interactions … Human Virome Program .  Nikos Kyrpides , head of the JGI’s  Microbiome Data Science , leads one project with JGI …
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You Can Move, But You Can’t Hide
… viruses and plasmids. They can be found in virtually all of Earth’s ecosystems. A software tool  recently described in  … software was created by researchers under the direction of Microbiome Data Science Group Lead Nikos Kyrpides at the … used computational resources from the Exascale Computing Project (17-SC-20-SC), a collaborative effort of the U.S. …
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Identification and characterization of a skin microbiome on Caenorhabditis elegans suggests environmental microbes confer cuticle protection
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