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JGI@25: Using Team Science to Build Communities Around Data
In honor of the JGI's 25th anniversary in 2022, we have revisited a … National Institute for Agricultural Research (INRAE) focused on in-depth exploration of ecology-related groups of … function across the phylogeny — and link these into our DOE crop plants, so we can learn from evolution that has …
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JGI & KBase at PAG XXVII
… 12-16, 2019, in San Diego, Calif. Representatives from the DOE Joint Genome Institute (JGI) and the  DOE Systems … with the JGI Community Science Program, and how you can use the KBase system to accelerate your plant genomics research. Click here to download a list of talks relevant to JGI science at PAG XXVII. On January …
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Extreme Scale De Novo Metagenome Assembly
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User Science
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Comparative genomics of citric-acid-producing Aspergillus niger ATCC 1015 versus enzyme-producing CBS 513.88
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Gut Fungi: Unexpected Source of Novel Chemicals
The Science Anaerobic fungi, which die in the presence of oxygen, dwell in herbivore guts and help them digest … just like we do. Oxygen is a rich source of energy, and because anaerobic fungi can’t harness it, scientists long held … genomes were sequenced by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… samples — from plants, algae, bacteria, archaea, fungi, viruses — to support scientists around the world. Most of those researchers send their samples in from afar, without ever hearing much about the sequencing lab. So today, …
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A Natural Mechanism Can Turbocharge Viral Evolution
Understanding how a fundamental mechanism of evolution allows microbes to adapt to changing … membrane. Two decades ago, a team discovered a group of viruses that had in their genomes a surprising tool: a … a team led by scientists at the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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Meanders as a scaling motif for understanding of floodplain soil microbiome and biogeochemical potential at the watershed scale
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Prokaryote Program User Advisory Committee
The Prokaryote Advisory Committee is chartered to offer advice, guidance and counsel on the effective management and strategic objectives of the … and scientific relevance and quality. The Committee does not perform management functions nor does it direct the …
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Fungal & Algal Program User Advisory Committee
… is chartered to render advice, guidance, and counsel on the effective management and strategic objectives of the Program. The Committee serves as the Program's key … and scientific relevance and quality. The Committee does not perform management functions nor does it direct the …
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Scaling metagenome sequence assembly with probabilistic de Bruijn graphs
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