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Natural Prodcast Episode 23: Aaron Puri
… restricted niche. And they do need broad host-range genetic tools so it’s more complicated than working with something … thing I’ve learned is that when JGI gives you a ton of data you better have someone really smart to be able to … And so now that’s what I’m joking about having a lot of data. It’s a lot of metabolomics data sets. So what have we …
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Mission
… provide advanced genomic capabilities, large-scale AI-ready data and professional expertise to support the global … this mission by enabling large-scale genomic discoveries, data integration, and AI-driven analyses that convert …
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CSP Large Scale Call
… for scientific merit, DOE mission relevance, proposed data usage by the applicant/community, and track record of … for scientific merit, DOE mission relevance , proposed data usage by the applicant/community, and track record of …
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Webinar: MycoCosm Tutorial
… Learn more about JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics data and comparative analysis tools. Questions and Answers 1.  Q(uestion): Do you accept … genomes 17.  Q: How do we find the parameters, values and softwares/packages used by JGI to create these syntenic …
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A Plant Root Atlas for Tracking Developmental Trajectories
… and combining the information with previously published datasets. The work was  recently published in the journal  … “This represents the largest integration of single-cell datasets in plants and provides a foundation for still … Strategic Plan. The present paper provides a foundational data set that is now available through a new  single-cell …
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Offerings & Capabilities
… capabilities to help advance their science by generating data in three overarching categories: DNA Sequencing , DNA … phenotypic, metabolomic, imaging, sensor, and other data produced at scales amenable to statistical analysis. To … new methodologies to enhance the integration of various data types.  …
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Accelerating Metagenomics Discoveries with Deep Learning
… an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or DNA sequencing data gathered … such as  Mash and  BBsketch , whose lead developer is JGI software developer Brian Bushnell, no alignment-free tool … Resources Division (CRD), in order to create more useful tools for the bioinformatics community. Other work presented …
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CSP New Investigator Call
… FICUS proposal.   Competitive projects will provide pilot data to assess feasibility of a novel approach or form the … for scientific merit, DOE mission relevance , proposed data usage by the applicant/community, and track record of …
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UC Merced Interns Reflect on Their JGI Summer Projects
… worked on ranged far and wide — from implementing new data visualization tools, to using natural language processing techniques to … a fruitful experience for mentors and students alike. Tools like Slack, Google Docs, and GitHub enabled virtual …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… By leveraging new tools and large-scale data mining, JGI researchers nearly tripled the available fungal mitochondrial genome data, unlocking new potential for AI-driven studies of …
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Network Modeling of Complex Data Sets
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The parallelism motifs of genomic data analysis
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