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User Support Analysis Group
… The User Support Analysis group provides computational analysis for new technology development and JGI user science projects. We perform analysis for diverse experiment types, … Our group also performs ‘proof-of principle’ research projects to demonstrate new genomic capabilities. Our group …
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Natural Prodcast Episode 5: Brad Moore
… Prodcast,” a podcast about the science and scientists of secondary metabolism.  Brad Moore, UC San Diego and Scripps … in his science. And he was working with some really cool projects at that time. So I was pretty stoked to be able to … right,  Dan: JGI did it in fact. Brad: That was a magical project I thought. Alison: And for those of us who don’t …
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Natural Prodcast Episode 15: Katherine Duncan
… Dan Udwary: Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today we’re going to talk … of North America. So then I came back and I worked on an EU project, the Scottish Association for Marine Science. And … awesome. I should point out that we also have a couple of projects in the lab that also work in microalgae as well. So …
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Natural Prodcast Episode 23: Aaron Puri
… another episode of Natural Prodcast. Right now I’m working on this the afternoon of the day I’m due to release it, … in terms of their natural products chemistry, and he has a project with the JGI to synthesize the genes for and explore … connected with a wonderful person who’s a Co-PI on a JGI project Amy Schaefer . So we’ve been friends ever since. …
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Frequently Asked Questions: Proposal Submission
… See below for a list of Frequently Asked Questions about our proposal submission process. You can review successful letters of intent and submissions at the bottom of the page.  … ; click on the call link to see specific details including project types supported, sample/capacity limits, and …
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JGI at the AGU Fall Meeting
… Meeting, with the theme “Science is Society,” hosts sessions in New Orleans and online. Register for the meeting … in One Proposal via FICUS December 13 8:12 am Convention Center eLightning Theater IV: Kuno Kasak, University of … poster B45O-1813  : Maggie Bowman, PNNL: “EMSL’s 1000 Soils Project: core collection strategy and data types available” …
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Microbiome Data Science Team
… Biology is currently experiencing a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent … of genomes from uncultivated microbes (Nature 2019). Other projects in the group include the sequencing and comparative …
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Fungal Friends or Foes in Plant Roots
… Uncovering associations between plant roots and fungi that can help or harm … on the fungal Tree of Life through the 1000 Fungal Genomes Project. Hacquard’s group had assembled a mycobiome culture … is an “excellent example” of how a 1000 Fungal Genomes project can enable studies of plant root microbiome and …
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Doubling Down on Known Protein Families
… Using a novel computational approach, researchers confirm microbial diversity is wilder than ever. Imagine … Lab), and collaborators across multiple other research centers around the world. “We’ve more than doubled the … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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Team Science Reveals Important Protein in Poplar
… bioenergy crops The Science Scientists at Brookhaven National Laboratory (BNL) led a team that  identified a protein … within poplar involved in plant growth, lignin production, and disease resistance.  The Impact With increased … collaborators at multiple DOE facilities such as the Center for Functional Nanomaterials (CFN), National …
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JGI User Executive Committee Expands
… of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). They are: Ivan Baxter of the Danforth Center, Sundy Maurice of the University of Oslo, Aaron … environments. He’s been involved in several plant genome projects through the Community Science Program. As a UEC …
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… “ Berkeley Lab Receives Multiple 2021 HPCwire Awards ” on the Berkeley Lab Computing Sciences site. Lawrence … Lab), the National Energy Research Scientific Computing Center (NERSC), the DOE Joint Genome Institute (JGI), and … went to the Berkeley Lab team comprised of JGI and ExaBiome Project team, supported by the DOE Exascale Computing …
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