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Decoding Yellowstone’s Microbial Mats
… Park to study how cyanobacteria are living, communally, in microbial mats. Along the way, they’ve encountered … new technologies, and made a few discoveries about the microbial mat denizens.  …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… Analysis reveals the microbial community involved in a bioremediation effort. The … and analysis, the researchers identified other bacteria and microbial processes that support PCE biodegradation. The … Laboratory and used to identify the microbes involved in successfully biodegrading PCE.  Through the JGI’s  Community …
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Building Sphagnum Genomic Resources
… The Science Enabled by the JGI’s Community Science Program (CSP), researchers are developing a number of resources to … the ecosystem response to climate change. Through the CSP, researchers are aiming to have two high quality … seven novel species of Acidobacteria through an approved CSP proposal. The researchers found that these species …
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Genome assembly and annotation of microalga Nannochloropsis oceanica C018.
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JGI@25: Roots of a Mutualist Relationship
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Marine Microbe Contains Multitudes
… A deep dive into microbial genomics reveals one bacterial species is made of … Time-series (HOT), they collected samples of the ocean’s microbial communities periodically at different depths. In … software suite, BBTools , and relying on the JGI Integrated Microbial Genomes & Microbiomes (IMG/M) system . By …
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Microbial Genomics & Metagenomics (MGM) Workshop
… Genome Institute (JGI) is offering a five-day workshop on Microbial Genomics and Metagenomics. Details: … is designed to familiarize users with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows …
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Natural Prodcast Episode 1: The Primer, Part 1
… right. So I did a PhD in microbiology at MIT, and I studied microbial ecology. I studied Vibrio species in the ocean, so … We’re looking at a schematic of different pathways in a microbial cell, it looks like. It could be a eukaryotic … I’m looking at it with, you know, it’s within a species or microbial population, you have some set of shared traits …
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Graduate Students Get Thesis Research Opportunity at the JGI
… of the latest SCGSR award is Mo Kaze, part of the 2018 cohort of the JGI-UC Merced Genomics Internship … to an exceptional caliber of scientists.” For her project, “Microbial Community Structure and Methane Production in … microbiomes. Tringe was also Kaze’s mentor during her 2018 internship, in which she explored anthropogenic impacts …
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JGI announces 2025 Functional Genomics awardees
… genomic information into biological function. Through our  CSP Functional Genomics call , we look for projects that … crops through transcriptional network mapping, developing microbial systems to convert renewable feedstocks into …
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… applied to samples collected from acidic iron-oxide microbial mats in Yellowstone National Park over time, … role in the development of life on Earth; the iron-oxide microbial mats at Yellowstone offer researchers an analog … Inskeep of Montana State University has been conducting microbial field studies at Yellowstone, and in this latest …
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JGI@25: From Life at the Extremes to Editing Genomes
… Science group led by Nikos Kyrpides , mining the Integrated Microbial Genomics & Microbiomes (IMG/M) system’s immense … has resulted in several papers, including one in 2018 on the discovery of miniature CRISPR-associated … Cell. 2019 Feb 21;73(4):727-737.e3. doi: 10.1016/j.molcel.2018.12.015. Harrington LB et al. Programmed DNA destruction …
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