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The role of zinc in the adaptive evolution of polar phytoplankton
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Broad spectrum developmental role of Brachypodium AUX1
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… attempts at virus infections. Their genomes include short DNA sequences that code for CRISPR systems, which help … they compared samples collected from an aquifer in 2012 and 2018 against a biofilm sample collected in 2018. They looked for and found CRISPR spacer sequences in …
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VirSorter2: a multi-classifier, expert-guided approach to detect diverse DNA and RNA viruses
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DNA Scanner: a web application for comparing DNA synthesis feasibility, price and turnaround time across vendors
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j5 DNA Assembly Design Automation
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Kjiersten Fagnan
Dr. Fagnan was appointed CIO of the JGI in 2016, and in 2018 was hired to be the JGI’s Data Science and Informatics department head. In 2018, Dr. Fagnan was part of the Gordon Bell prize winning … Performance Computing, Networking, Storage and Analysis, 2018, pp. 717-730, doi: 10.1109/SC.2018.00060. …
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Supercharging SIP in the Fungal Hyphosphere
… probing helps ID novel interactions between bacteria and fungi The Science Researchers have successfully automated … isotope to it. The isotopes are incorporated into the DNA of specific microbes who consume the labeled food or … samples simultaneously. Soil microorganisms play a critical role in sequestering carbon and mitigating greenhouse gas …
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Role of diversity-generating retroelements for regulatory pathway tuning in cyanobacteria
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JGI Portals
… and analysis tools for comparative genomics of fungi. Mycocosm enables users to navigate across sequenced … and to conduct comparative and genome-centric analyses of fungi and community annotation. … Phycocosm is a …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… what we strive for,” Visel said. Practical Applications for Fungi Wint began working on the project that culminated in this publication during her summer internship in 2018. She selected one of the projects posted by JGI fungal … successful,” Wint said. “Fungi play an important role in the earth’s ecosystem,” said Salamov, one of Wint’s …
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David Goodstein
… as the JGI’s eukaryote research efforts expanded to include basal metazoans and plants. Working with a talented team of …
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