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… technology in order to enhance the quality of single-cell genomes and directly link functional information with … DNA amplification, and sequence analysis to recover the genomes of uncultivated microbes. We also apply labeling … To provide additional functional insights into microbial genomes, the JGI now uses laser microdissection to …

DOE National Laboratories, the Community Science Program (CSP), and external collaborations. The Director ensures the … the Genomic Encyclopedia of Actinobacteria with 824 Isolate Reference Genomes. Cell Genomics 2: 100213Nayfach S et al. 2021. A …

Repertoire in Actinobacteria Over the years more than 3,400 genomes have been sequenced from curated DSMZ isolates, for … reactions. For this article alone, more than 600 genomes (dubbed “GEBA-Actino”) were sequenced from DSMZ … collapsed, while these issues are not commonly seen with reference isolates. “For secondary metabolite discovery in …

Dr. Fagnan was appointed CIO of the JGI in 2016, and in 2018 was hired to be the JGI’s Data Science and Informatics department head. In 2018, Dr. Fagnan was part of the Gordon Bell prize winning … Performance Computing, Networking, Storage and Analysis, 2018, pp. 717-730, doi: 10.1109/SC.2018.00060. …

… the  Nature   Reviews column all started with an email in 2018.  Tanja Woyke , who leads the  Microbial Program at the … move toward characterizing the human microbiome  by its genomes and metagenome , rather than just by 16S ribosomal … to (meta)genomics, and at least one of the papers they reference should be hot off the press. She tells prospective …

… students summer research experience at the JGI. On July 26, 2018, the JGI celebrated the culmination of the fifth summer … Group who has mentored several of the students including 2018 intern Candace Cole, noted that “each year, they bring … fellow in Tanja Woyke’s Single Cells Group who mentored 2018 intern Akshay Paropkari, echoed the sentiment, saying, …

… (INRAE). Today, there are nearly 200 mycorrhizal fungal genomes publicly available on the fungal portal MycoCosm, many sequenced through the JGI 1000 Fungal Genomes Project.       Francis Martin on the main impact of ectomycorrhizal fungi, excerpted from his talk at the 2015 JGI Annual …