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How Filamentous Fungi Sense Food
Tracing gene regulatory networks in the model fungus  … crassa . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to …
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Emiley Eloe-Fadrosh
Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in microbial ecology and metagenomics. Her current research focuses on leveraging thousands of metagenomic datasets from host-associated and … research at the Institute for Genome Sciences at the University of Maryland School of Medicine and her graduate …
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JGI@25: From Life at the Extremes to Editing Genomes
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … challenges. Congratulations to Jennifer Doudna of the University of California (UC), Berkeley and Lawrence …
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Introducing New Members of the JGI User Executive Committee
The JGI welcomes three new members to their User Executive Committee … serving on the UEC – go here to view the full roster of members. Each of the researchers had their own reasons … to serve on the UEC. For microbial ecologist Gilbert at the University of California (UC) San Diego, being on the UEC is …
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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
This is the third and final episode of our series on a giant metagenome assembly from Wisconsin’s Lake Mendota. In the last two episodes, we’ve covered the specialized software and supercomputers behind …
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JGI at the AGU Fall Meeting
This year the AGU Fall Meeting, with the theme “Science is Society,” hosts sessions in New Orleans and … Register for the meeting here. Here are some sessions of interest (all times in PST unless otherwise noted): … am Convention Center eLightning Theater IV: Kuno Kasak, University of Tartu (lightning talk): “Wetland Restoration …
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Ian Blaby
Since 2019 Dr. Blaby heads the DNA synthesis platform at the … National Laboratory where he focused on functional genomics of phototrophs. Through this and post-doctoral positions at University of Florida and UCLA he has worked with a wide …
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Adopt-A-Genome
… episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These students … research. Hear from Rekha Seshadri (JGI) and Matt Escobar (California State San Marcos) about how the Adopt-A-Genome … and Mark Soghomonian share what it was like to take on one of these genomes.  …
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Understanding Wildfire Recovery, Starting in Soil
A metagenomic look at the soil microbes present a year after a wildfire. … begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, … This work brought together researchers from Colorado State University, the US Forest Service, New Mexico State …
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The More the Merrier: Making the Case for Plant Pan-genomes
Brachypodium model system traces polyploid genome evolution. … plants; at least once during their evolution, the genomes of flowering plants multiply. Over time, plants lose many … de Aula Dei (EEAD-CSIC) (Spain); Fundación ARAID (Spain); University of California, Berkeley; Gregor Mendel Institute …
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JGI User Executive Committee Expands
Six new members have been elected to the User Executive Committee (UEC) of the U.S. Department of Energy Joint Genome Institute … Ivan Baxter of the Danforth Center, Sundy Maurice of the University of Oslo, Aaron Robinson of Los Alamos National …
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Metagenome-Assembled Genomes from a Microbiome Grown in Dairy Manure Hydrolysate
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