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An Integrated Dataset to Understand Ecosystem Interaction
… yields a comprehensive tree and soil dataset for understanding the dynamic relationship between poplar trees and their … work and how healthy they are, a recent data set  outlined in  Scientific Data connects molecular features to large … ) conducted by the U.S. Department of Energy Joint Genome Institute (https://ror.org/04xm1d337), a DOE …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… gas, regulate Earth’s climate. Most methane is produced in environments without oxygen through a process called … Program — as well as through the Facilities Integrating Collaborations for User Science Program (FICUS) with the … engineering of new, optimized methane-making microbes. In collaboration with the JGI and EMSL, Hatzenpichler’s lab …
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The JGI Data Portal: Improving User Experience
… The human-centered, agile collaboration between the JGI and the information technology company Truss has resulted in the JGI Data Portal , a pilot download experience … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Defining a Pan-Genome for Antarctic Archaea
… Analysis of haloarchaeal metagenomes broadens understanding of Antarctic biogeography. The Science Haloarchaea flourish in hypersaline environments, and researchers are interested … microbial populations on Antarctica distinct and unique. In collaboration with the DOE Joint Genome Institute, a DOE …
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Building Sphagnum Genomic Resources
… Sphagnome data would enable researchers’ insights on their potential carbon cycling impact.   The Science Enabled by the JGI’s Community … in diverse environments. In addition, this work reflects a collaboration between two programs within different … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office of Science …
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Uncovering Novel Genomes from Earth’s Microbiomes
… metabolites for multiple applications. Despite advances in sequencing technologies and computational methods in the … from Earth’s Microbiomes) catalog, this work results from a collaboration involving more than 200 scientists, … microbes,” said Eloe-Fadrosh, “and we felt that the collaboration with  KBase would add value beyond clustering …
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Busting the Unbreakable Lignin
… of plant components   The Science There are three main ingredients to tackle when it comes to breaking down a plant for energy: Cellulose, hemicellulose and … The authors acknowledge their funding sources: Office of Biological and Environmental Research … of the U.S. Department of Energy grant DE-SC0020420 (MAO), Institute for Collaborative Biotechnologies grants …
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Open Frameworks Training the Next Generation of Scientists
… Educational training technologies provide opportunities for students and … data. These instructors teach microbiome science with collaboration and peer-support through regional cohorts and … SB was supported by the National Science Foundation Integrative Organismal Systems - Plant Biotic Interactions …
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Graduate Students Get Thesis Research Opportunity at the JGI
… Kaze, part of the 2018 cohort of the JGI-UC Merced Genomics Internship Program. Kaze is part of Mark Sistrom’s lab at … a remarkable opportunity to launch a pilot project and begin the work of understanding how engineered environments … with the DOE Systems Biology Knowledgebase (KBase) , in collaboration with computational biologist Dylan Chivian and …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… tools and data hub for NIH program. While the microbes in, on and around Earth outnumber the stars in the Milky Way, viruses outnumber the microbes by at least … activities. The hub, named Consortium Organization and Data Collaboration Center (CODCC), is led by a team of highly …
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Forming Scientific Connections and Building Community
… The 11th cohort of JGI-UC Merced interns pick highlights from their summer experiences. This year the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … being a part of a dynamic and innovative environment where collaboration and research discovery are at the forefront.” …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a podcast about natural … Dr. Francisco (Paco) Barona- Goméz is a Principal Investigator at Cinvestav UGA-Langebio in Irapuato, Mexico. …
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