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Temporal dynamics in a red alga dominated geothermal feature in Yellowstone National Park
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Omics-driven onboarding of the carotenoid producing red yeast Xanthophyllomyces dendrorhous CBS 6938
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … cell. Several years later, the continuing single cell sequencing collaboration between the JGI and Bigelow Lab led …
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Enzymatic Adaptation of Podospora anserina to Different Plant Biomass Provides Leads to Optimized Commercial Enzyme Cocktails
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Transgenic Expression of the Dicotyledonous Pattern Recognition Receptor EFR in Rice Leads to Ligand-Dependent Activation of Defense Responses
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JGI@25: Studying Sorghum’s Survival Skills
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have … improve the genome’s accuracy, and increase its length by 29.5 Megabasepairs. 2017: Pan-genome analysis of sorghum …
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Evolution of a Fungal Gene Expression Regulator
… Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. The … (epigenome).  In  Nature Ecology & Evolution , a team led by Robert Schmitz at the University of Georgia and including … specific 5mC methyltransferase (MTase) variants. Using new sequencing technologies for producing both reference genomes …
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… early Earth conditions. The Science Through a combination of sequencing tools and techniques applied to samples … found in iron-oxide microbial mats. The reddish hues caused by the presence of iron led Inskeep and his colleagues to … the team relied on a combination of phylogenomic analyses, transcriptomics for microbial genomic activity (gene …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … metagenomes began to offer a window into viral existence. Along with highlighting the viruses in a given sample, … That study multiplied the number of known viral genes by a factor of 16. The same year, the JGI expanded its …
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The genome sequence of the psychrophilic archaeon, Methanococcoides burtonii: the role of genome evolution in cold adaptation
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Large-scale genome sequencing of mycorrhizal fungi provides insights into the early evolution of symbiotic traits
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Draft Genome Sequences of Three Monokaryotic Isolates of the White-Rot Basidiomycete Fungus Dichomitus squalens
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