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JGI@25: Solving the Mystery of the Missing Oil
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and …
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A Mentor’s Perspective on Training the Next Generation
… Over the years, hundreds of interns have come to the JGI from all parts of the globe to gain lab …
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Streamlining Regulon Identification in Bacteria
… RIViT-seq technology could speed up associating transcription factors with their target genes. The Science Regulons are a group of genes that can be turned on or off by the same regulatory protein. … the third is determining the 5’-ends by 5’-end sequencing, from which those promoter sequences recognized by a given …
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Promoting the Power of Viral Metagenomics
… An article summarizing the field of viral metagenomics, authored by JGI … the world have been forced to confront the awesome power that viruses have to affect nearly every aspect of our daily … DNA or RNA contained in a sample that has been collected from any kind of environment you can think of – animal …
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Mike Sneddon
… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint … compute platforms and bioinformatics annotation pipelines that support JGI’s portals, tools, and the DOE’s emerging … earned his PhD in Computational Biology and Bioinformatics from Yale University. …
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JGI@25: Studying Sorghum’s Survival Skills
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable … reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have …
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The Mobilome in the Mire
…   For years, researchers have known that many datasets miss a key part of microbial genomes: the … MGEs, that can move between organisms. But now, deep sequencing and new analysis methods are bringing this mobilome into … (JGI) as they talk about their recent work on a time series from Sweden’s Stordalen Mire. …
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the … include the development of novel computational tools to identify virus sequences, the design of new … B.S. in Microbiology, Université Blaise Pascal, France M.S. in Data Analysis and Modeling for Life Sciences, Université …
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Discovery and ecogenomic context of a global Caldiserica-related phylum active in thawing permafrost, Candidatus Cryosericota phylum nov., Ca. Cryosericia class nov., Ca. Cryosericales ord. nov., Ca. Cryosericaceae fam. nov., comprising the four species
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Viruses Reprogram Cells into Different Virocells
… Microbial cells infected by viruses undergo metabolic reprogramming. The … must be a duck. But if the duck gets infected by a virus so that it no longer looks or quacks like one, is it still a duck? For a team led by researchers from The Ohio State University and the University of …
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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
… This is the third and final episode of our series on a giant metagenome assembly from Wisconsin’s Lake Mendota. In the last two episodes, we’ve covered …
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JGI announces 2024 New Investigator portfolio
… The JGI is eager to work and share our tools with a widening circle of researchers. That’s why each year we look for novel research projects — aligned with DOE missions and from PIs who have not led any previously-accepted proposals …
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