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IMG/VR
… JGI's Simon Roux describes the structure and content of the IMG/VR v3 database (img.jgi.doe.gov/vr), the latest release of IMG database dedicated to viral genomes assembled from metagenomes. He also demonstrates briefly how to …
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JGI Accepts 17 Proposals for Community Science Program
… Interactions Within Ecosystems Latest portfolio of approved proposals highlight biodiversity and how ecosystems are adapting to stresses. A total of 17 proposals have been approved through the annual … (Berkeley Lab). They were selected through peer review from 41 full proposals out of 50 letters of intent …
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JGI at the AGU Fall Meeting
… Register for the meeting here. Here are some sessions of interest (all times in PST unless otherwise noted): … December 7   9:15am PT (online) Town Hall on the role of user facilities in accelerating research and tips for … context for thousands of newly sampled microbial genomes from North American watersheds (Invited)” 4pm CST Convention …
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The Soil Blooms Green
… Every fall, a mysterious green growth appears on top of farmers’ fields: a microbial community that might be …
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JGIota: Looking Back at Sequencing for Soybeans
… The soybean is a crop that could boost biofuels and fertilize fields. So in 2010, the JGI helped … threatens this important crop. Hear more about that work from researchers Gary Stacey (University of Missouri), Peter van Esse (The Sainsbury Laboratory) and …
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Creating an Energy Market for Miscanthus
… Miscanthus will need some upgrades. In this episode, hear from scientists working on understanding Miscanthus biology …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… Ancient  Chloroflexota s ditched their flagella and other traits when … in an unexpected place: hot spring-dwelling bacteria from the phylum C hloroflexota . Research shows that flagella were lost in other … ) conducted by the U.S. Department of Energy Joint Genome Institute …
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Ancient Algae Reveal Secrets of Plant Evolution
… 600 million years ago. The Science By studying the genes of land plants’ closest algal relative,  Zygnematophyceae , … enhanced our understanding of how early plants transitioned from water to land. Key gene groups involved in stress … are interconnected, suggesting that this genetic network was already in place in ancient algae. Essentially, …
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A Shrubbier Version of Rubber
… Right now, our natural rubber comes from just one tree species: Hevea brasiliensis . It’s great …
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JGI announces 2023 CSP Functional Genomics awardees
…   Each year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help translating genomic … synthesis and omics capabilities to enhance understanding of gene and genome function.  Below find a list of the six …
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The Megadata of Lake Mendota - Part 1: Many, Many Mers
… Lake Mendota sits right next to the University of Wisconsin, Madison. And Trina McMahon's lab has been sampling the microbes of that lake for over 20 years, to understand how the … next 3 episodes are the story behind that giant assembly from Lake Mendota. In this episode: the software evolution …
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Promoting the Power of Viral Metagenomics
… An article summarizing the field of viral metagenomics, authored by JGI researchers Lee … , was  recently published in the journal  Annual Review of Biomedical Data Science . The following guest piece was … DNA or RNA contained in a sample that has been collected from any kind of environment you can think of – animal …
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