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Internship … Cross Species Integration of Single Cell Transcriptomes … Exploring and Visualizing P. hallii Mutant Library … Evaluation of Binning Tools … Root … Cross Species Comparison of Plant Single-cell Transcriptomes of Rice and Arabidopsis Roots … Making Big …

… into soil and boosting biofuel feedstocks with less fertilizer. For millions of years, underground fungi have lived in symbiosis with plant roots. Plants provide photosynthesized carbon, while fungi deliver water and nutrients. In … multiple directions. On the fungi side, underground mycorrhizal networks can serve as a reservoir for carbon compounds …

… into soil and boosting biofuel feedstocks with less fertilizer. For millions of years, underground fungi have lived in symbiosis with plant roots. Plants provide photosynthesized carbon, while fungi deliver water and nutrients. In … multiple directions. On the fungi side, underground mycorrhizal networks can serve as a reservoir for carbon compounds …

Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with genomes from other … plants and fungi have mutually beneficial (e.g., mycorrhizal) relationships, but not all plants and fungi can form … from natural Arabidopsis populations around Europe. The JGI sequenced and annotated 41 fungal isolates from the …

Santa Barbara Ph.D. in Chemistry and Biochemistry, Arizona State University Post-doc in Metabolomics, The Scripps … 29;12(1):1-6. https://doi.org/10.1038/s41467-021-22765-1 Zengler K et al . EcoFAB: Advancing microbiome science through standardized fabricated ecosystems. Nature Methods (16), 567–571 …

… from the microbes found in the oil plume from Deepwater Horizon oil spill led to a draft genome of the first deep-sea, … a team studying microbial populations in oxygen minimum zones identified SAR11 bacteria as initiators of nitrogen … cell (seen here in a glass capillary), researchers sequenced and assembled the first complete genome of an …

… to clean energy generation and environmental characterization and cleanup. The JGI provides integrated …

… more about PhycoCosm, the largest interactive collection of sequenced algal genomes, omics data and comparative analysis …

… uniquely powerful in helping scientists link plant genetic sequences to what they do. But sequencing the genome of one …

… to browse and search through the more than 2 million viral sequences available in IMG/VR v3. …

… development of novel computational tools to identify virus sequences, the design of new experimental approaches to link … to their host(s), collaboration with JGI users for analyzing viral datasets, and the organization of community-building efforts in the field of viral …

In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These students analyze the genomes, write reports, and publish first-author …