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… Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … Igor Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … of binning methods, we were able to recover Olpidium sequences from the “contaminated” genome data with strong …

… Fine-tuning metabolic gene expression helps identify variants in … to expression, scientists can now opt for various shades of grey. The ability to fine-tune the level of gene expression allowed researchers to identify … Foundation, and the JGI Synthesis Program under FP00005685. In addition, M.D. acknowledges funding from a National …

… Researchers start pinning down how a fungal symbiont spurs growth of poplar, a potential biofuel feedstock.     The Science … in order to get  M. elongata and  I. europaea  genomes sequenced and annotated for this study. The team found that, … This work was supported by the Plant-Microbe Interfaces program at the Oak Ridge National Laboratory …

… Twice a year, the DOE Office of Science Graduate Student Research (SCGSR) program … Kaze, part of the 2018 cohort of the JGI-UC Merced Genomics Internship Program. Kaze is part of Mark Sistrom’s lab at … a remarkable opportunity to launch a pilot project and begin the work of understanding how engineered environments …

… New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science … mushroom genomes, and assembling genomes from 60 existing sequences, this work expands the family tree for Lentinula. … the GENOBIOREF (BIO2017-86559-R) project of the Spanish Ministry of Science and Innovation (cofinanced by FEDER …

… Uncovering associations between plant roots and fungi that can help … host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with … from natural Arabidopsis populations around Europe. The JGI sequenced and annotated 41 fungal isolates from the …

… In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both … Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially relevant … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … cell (seen here in a glass capillary), researchers sequenced and assembled the first complete genome of an …

… High-throughput stable isotope probing helps ID novel interactions between bacteria and fungi … The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial … process — as well as a key way scientists study microorganisms. Because microorganisms live in complex …

… Learn more about PhycoCosm, the largest interactive collection of sequenced algal genomes, omics data and comparative …

… Despite their diminutive stature, “short plants” such as mosses could be … uniquely powerful in helping scientists link plant genetic sequences to what they do. But sequencing the genome of one short plant — fire moss — had an unexpected …

… JGI's Simon Roux describes the structure and content of the IMG/VR v3 database (img.jgi.doe.gov/vr), the latest … to browse and search through the more than 2 million viral sequences available in IMG/VR v3. …