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Eelgrass Proves to Be Much Younger Than We Thought
… Recent study shows eelgrass has been around about 2.5 million years less than … The Science Eelgrass, one of the most abundant plants in the ocean, originated in Japan before spreading around … locations.  One group investigated changes in protein sequences, while others analyzed single point mutations …
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Leo Baumgart
… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, following … BS in Biochemistry and Cell Biology, University of California, San Diego PhD in Molecular Biology, University of California, San Diego … and Viola Willemsen. "Two deeply conserved non-coding sequences control PLETHORA1/2 expression and coordinate …
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Tanja Woyke Elected to American Academy of Microbiology
… Congratulations to the JGI’s Tanja Woyke , who has been elected … of Microbiology (AAM) ! She is among the 68 new Fellows in the Class of 2020, selected from 118 nominees. The … methods to access the genetic material of uncultivated microbes and link their genomes to the roles they play in …
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Building Sphagnum Genomic Resources
… Sphagnome data would enable researchers’ insights on their … cycling is a carbon flux regulator since sulfate-reducing microbes prevent methane production by routing the carbon … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office of Science …
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Game On: High School Students Drive Everglades Metagenomics Study
… In late June, Kathleen Lail, a member of JGI’s Sample Management … samples to the JGI for sequencing.  While JGI processed, sequenced, and analyzed the soil samples, the JGI offered 7 … and Proteobacteria to be the most common phyla of bacteria sequenced from the metagenomic soil samples from the four …
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Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2T) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and
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Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended
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Secreted Effector Proteins of the Poplar Leaf Spot and Stem Canker Pathogen Sphaerulina musiva Manipulate Plant Immunity and Contribute to Virulence in Diverse Ways.
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Plant Microbial Interactions Group
… Plants are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial … Plant microbiomes hold the amazing ability to influence plant … We are using cutting-edge single-cell profiling methods, including …
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The fungus that made itself at home
… Retracing how the dry rot Serpula lacrymans adapted to a new … from similar organisms, researchers have gained insights on why the dry rot ( Serpula lacrymans ) is so destructive in … Serpula species, S. himantioides from Europe, that was sequenced and analyzed by the JGI. The researchers found …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… Trained on environmental data, a new JGI tool more accurately … community able to not just analyze but also create DNA sequences mimicking an array of microbial life. By … various environments, including oceans, lakes, mammalian guts, forests, and soils, ensuring a robust and …
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The genome of the intracellular bacterium of the coastal bivalve, Solemya velum: a blueprint for thriving in and out of symbiosis
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