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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US … first publicly available, river-focused microbial resource that provides information at multiple scales from genes to … program at Pacific Northwest National Laboratory. The JGI sequenced over 1,000 metagenomes and established …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
On February 17, 2021, JGI and the Environmental Molecular Sciences … 2021. Q&A from the Webinar: Q(uestion): Who can apply for this proposal call? A(nswer): We work with people from all … Q: In her presentation, Michelle O’Malley said that having constant conversations helped with the proposal …
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The Big Deal About Short Plants
Despite their diminutive stature, “short plants” such as mosses could be uniquely powerful in helping scientists link plant genetic sequences to what they do. But sequencing the genome of one …
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IMG/VR
JGI's Simon Roux describes the structure and content of the IMG/VR v3 database (img.jgi.doe.gov/vr), … to browse and search through the more than 2 million viral sequences available in IMG/VR v3. …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
In this short video, UC Merced undergraduate and graduate … lab. And I find this really valuable because in this time that I’ve been in my PhD program, I’ve been really focused …
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Simon Roux
Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development of novel computational tools to identify virus sequences, the design of new experimental approaches to link …
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New Research Sheds Light on Diversity in the Deep Sea
Microbial communities living near hydrothermal deep-sea vents hold … vents are ocean-floor openings in the Earth’s crust that emit hot, mineral-rich water. These vents are too deep … and yet they still support a unique array of microorganisms adapted to living in extreme conditions. At these …
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Adopt-A-Genome
In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the …
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Triggering Morel Fruiting
A collaborative team led by Hao Tan from the Sichuan Academy … M. importuna CCBAS932 from the forests of France, were sequenced and annotated by a collaborative team. The genome … supply to the soil. In contrast, isotopic evidence showed that morel mycelium colonizing the lignocellulosic-abundant …
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Forming Scientific Connections and Building Community
… interns pick highlights from their summer experiences. This year the U.S. Department of Energy (DOE) Joint Genome … to stop and having responsibilities. I like the environment that JGI brings and being able to be a part of …
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Applying Viral Genomics Expertise to Understanding the Human Virome
JGI researchers lend expertise to develop tools and data hub for NIH … system. The Program aims to better understand the viruses that coexist with humans – the “healthy” human virome - not … collection of UViGs by identifying contiguous viral sequences (“contigs”) from thousands of ecologically diverse …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable … of rumen-digested switchgrass, researchers isolated and sequenced DNA from rumen microbes involved in the digestion …
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