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Adopt-A-Genome
… papers, making the data available for future research. Hear from Rekha Seshadri (JGI) and Matt Escobar (California State …
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Laccase and Its Role in Production of Extracellular Reactive Oxygen Species during Wood Decay by the Brown Rot Basidiomycete Postia placenta▿ †
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Host population diversity as a driver of viral infection cycle in wild populations of green sulfur bacteria with long standing virus-host interactions
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… all the work that went into this program was the feedback from the graduate student interns; “it changed what I want … interns. For him, it was a special moment to see interns go from being “intimidated and nervous” at the beginning of the … was Travis Lawrence , the first graduate student intern from the 2014 cohort. After working on his post-doctoral …
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Finding the Fermenters
… recently compiled a list of with more than 8,300 organisms from multiple sources, including the U.S. Department of … ruminant guts, sediments, and anaerobic bioreactors. Aside from producing energy that the organisms can use to thrive, … a list of prokaryotes with fermentative metabolism from the literature. They then used the JGI’s GOLD and IMG …
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Robert Bowers
… physiology and community ecology of microbes sampled from the natural environment. …
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Honey Bee Gut Microbiota Divvy Up Dinner
But scientists have wondered exactly how the microbial community carries out its helpful metabolism: …
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The Mutualist Laccaria bicolor Expresses a Core Gene Regulon During the Colonization of Diverse Host Plants and a Variable Regulon to Counteract Host-Specific Defenses.
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The Genomes of the Fungal Plant Pathogens Cladosporium fulvum and Dothistroma septosporum Reveal Adaptation to Different Hosts and Lifestyles But Also Signatures of Common Ancestry
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Transcriptomics reveal a mechanism of niche defense: two beneficial root endophytes deploy an antimicrobial GH18‐CBM5 chitinase to protect their hosts
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A telomere-to-telomere genome assembly resource of Bipolaris sorokiniana, the fungal pathogen causing spot blotch and common root rot diseases in barley and wheat
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Computationally Classifying Fungal Lifestyles
… class  Dothideomycetes includes fungi that obtain nutrients from decaying organic matter (saprobes), and many plant … predicting plant pathogens (blue) vs saprobes (green). (From Haridas S et al.  Studies in Mycology , 2020.) Using whole genome data from newly sequenced genomes, they also built a high-quality …
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