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New and Improved: Eucalyptus Reference is Now Accessible
… An improved genome assembly to support targeted tree breeding for the bioeconomy.   The Science Researchers report a … genome for eucalyptus in the July edition of the journal G3 Genes | Genomes | Genetics , with significant advances … are 900 species of eucalyptus. The trees are fast-growing plantation crops that supply wood and fiber for various …
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Yasuo Yoshikuni
… has been head of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the power of DNA synthesis, strain engineering, and biosystems design for … for non-model organisms, modulating microbe-microbe and plant-microbe interactions in various environments to …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… Igor Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of fungi by James et al. and Sekimoto et al . …
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The genome of Polaromonas naphthalenivorans strain CJ2, isolated from coal tar‐contaminated sediment, reveals physiological and metabolic versatility and evolution through extensive horizontal gene transfer
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Duplications and losses of genes encoding known elements of the stress defence system of the Aspergilli contribute to the evolution of these filamentous fungi but do not directly influence their environmental stress tolerance
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Genomic Encyclopedia of Bacterial and Archaeal Type Strains, Phase III: the genomes of soil and plant-associated and newly described type strains
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In depth metagenomic analysis in contrasting oil wells reveals syntrophic bacterial and archaeal associations for oil biodegradation in petroleum reservoirs
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… Accepted proposals emphasize JGI interests in algae and secondary metabolites. A total of 27 … and then use computational tools to analyze biosynthetic gene clusters and then develop them for a range of … to crowdsource antimicrobial discovery for the control of plant pathogens, partnering with 600 instructors worldwide …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… In the summer of 2015, Adam Session was a postdoc working at … how crops and model organisms may evolve.  Determining the genetic codes of plants is often challenging because in many plants …
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Gut Fungi: Unexpected Source of Novel Chemicals
… Fungi from herbivore poop make surprisingly complex compounds — an energetically expensive feat … compounds may also be involved in how the fungi metabolize plant biomass, which could inform how scientists can more … Swift — verified that the fungi expressed biosynthetic gene clusters, which are “building blocks” of natural …
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Multicellular magnetotactic bacteria are genetically heterogeneous consortia with metabolically differentiated cells
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Digging into Microbial Ecosystems Deep Underground
… “Microbes underpin so much of what we see on earth in terms of nutrient cycles and biogeochemical cycles…. … -Mike Wilkins, Colorado State University GI users and microbiome researchers Mike Wilkins and his graduate student …
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