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Fungus Fuels Tree Growth
… Researchers start pinning down how a fungal symbiont spurs … always found among and within poplar trees, and in an effort to understand its influence on the plant, a team of … fine-tune their engineering efforts of both plants and root microbiomes to grow energy crops more efficiently. Summary …
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First Monoploid Reference Sequence of Sugarcane
… Sorghum genome serves as a reference for the highly complex sugarcane genome . The Science Most … of 10 billion bases (more than three times the size of the human genome). As part of a proposal by the DOE’s Joint … This work was supported by the International Consortium for Sugarcane …
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Mapping Heat Resistance in Yeasts
… A new approach for improving functional annotation in fungal genomes. The … production. Efforts such as the 1000 Fungal Genomics Project led by the DOE Joint Genome Institute (JGI), a DOE … phenotype using a strategy called reciprocal hemizygosity analysis via sequencing (RH-Seq). Strains of S. cerevisiae …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… Gardeners and farmers around the country recognize that crop … a combination of really cutting-edge genomics and genetic analysis with large scale data collection,” he added. Jeremy … across the chromosomes. “In the past, we needed model systems to test genetic hypotheses in species with large and …
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JGI announces 2025 Functional Genomics awardees
… [ Pictured from left: [Above] Hao Chen, Matthew Cope-Arguello, Theophilus Olufemi … Benjamin Woolston. ] Each year, the JGI accepts proposals for state-of-the-art functional genomics research from … transcriptional network mapping, developing microbial systems to convert renewable feedstocks into advanced …
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Gut Fungi: Unexpected Source of Novel Chemicals
… Fungi from herbivore poop make surprisingly complex compounds — an energetically expensive feat thought to be too costly for them. The Science Anaerobic fungi, which die in the … This research project was supported by a grant from Santa Barbara Cottage Hospital and the University of California, Santa Barbara and a gift from the Gordon and Betty …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… More than 20 UC Merced students have contributed to the research of … the difficult early stages, so I can begin biological analysis of the data sooner than I anticipated.” In her … graduate intern): In her final year in the Quantitative & Systems Biology PhD program at UC Merced under the …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… Ancient  Chloroflexota s ditched their flagella and other traits when migrating … . Research shows that flagella were lost in other forms of  Chloroflexota that adapted to marine environments … understanding of how these bacteria evolved could help inform engineering microorganisms for biofuel production and …
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The Complete Multipartite Genome Sequence of Cupriavidus necator JMP134, a Versatile Pollutant Degrader
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
… On February 17, 2021, JGI and the Environmental Molecular Sciences … a Single Proposal webinar, inviting researchers to apply for access to multiple genomics and molecular … support, how much help can users expect for data analysis of the different omics analysis? Are users expected …
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The molecular dimension of microbial species: 3. Comparative genomics of Synechococcus strains with different light responses and in situ diel transcription patterns of associated putative ecotypes in the Mushroom Spring microbial mat
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Virus-Microbe Interactions of Mud Island Mangroves
…   Later this year, Ian Rambo, a graduate student in Brett … work was overseen by Susannah Tringe, head of the Microbial Systems group. He also worked with Simon Roux and David … the SCGSR research experience was “an ideal opportunity for me to get real-world experience.” As he finalizes his …
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