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Exploring the Diversity of the American Prairie’s Switchgrass
… A tall native plant of the North American prairie, switchgrass ( Panicum virgatum ) has long been a tantalizing potential biofuel feedstock. But switchgrass has a … traits — height, biomass, hardiness to cold, etc. — to its genes. The undertaking took shovels, trucks — and more than …
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An Earth Month Look at Sustainability Efforts at the JGI
… Sustainable Berkeley Lab maintains a  calendar of Earth Month … Garden Club, hosted a DIY Succulent Workshop and Plant Sale. All year, the JGI helps support finding … Garden Club In her work at Berkeley Lab, Doina Ciobanu generally works at a single-cell level as part of the JGI …
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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The … (polyploidy) and insights into the dynamics of gene expression as it grows back vigorously year after year … miscanthus often appear in discussions of rapidly growing plants whose biomass can be renewably converted into energy …
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DAS Tool for Genome Reconstruction from Metagenomes
… Developing and validating an integrated approach to genome recovery … contributions, is key to understanding their ecosystem functions in processes ranging from nutrient cycling to … and characterizing entire microbial genomes from sequences generated from environmental samples. The work aligns with …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… The JGI Engagement Webinar held November 5, 2020 (watch the  video below, captions … measurements of primary and secondary metabolites from plants, microorganisms, and environmental samples using … et al.  MAGI: A Method for Metabolite Annotation and Gene Integration . ACS Chem Biol. 2019 Apr 19;14(4):704-714. …
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Analyses of expressed sequence tags from the maize foliar pathogen Cercospora zeae-maydis identify novel genes expressed during vegetative, infectious, and reproductive growth
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Genomic analysis of 94 SEMIA strains isolated from common bean nodules: species diversity and genes related to nodulation, nitrogen fixation, and tryptophan metabolism
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Detection of short-term cropping system-induced changes to soil bacterial communities differs among four molecular characterization methods
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Ice cover extent drives phytoplankton and bacterial community structure in a large north‐temperate lake: implications for a warming climate
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Coral mucus rapidly induces chemokinesis and genome-wide transcriptional shifts toward early pathogenesis in a bacterial coral pathogen
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Codon bias, nucleotide selection, and genome size predict in situ bacterial growth rate and transcription in rewetted soil
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Amplicon sequencing of ice and water phytoplankton and bacterial communities during an extreme winter in a central Canadian great lake
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