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JGI Hosts GPU Hackathon in May
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Refining the Process of Identifying Algae Biotechnology Candidates
… stresses, and its transcriptome to learn more about which genes expression patterns. The analysis led to the … identification of several transcription factor regulating genes and enzymes that can modify composition of algal …
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… to recover high value products from human waste. They   genetically modified yeast to efficiently convert elements … and it could be sold in the United States for $50-200, generating a potential profit of $1.4 million annually.  The … working on developing new microbial strains that can synthesize other bio-based materials. For information about …
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Effects of Polar Light Cycle on Microbial Food Web
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Silver age of GOLD introduces new features
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… it’s difficult to link the connections to them from the genetic elements that scientists have found, e.g. plasmids … using a method named Multiple Displacement Amplification to generate enough DNA to put on a sequencer. As previously …
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Help from Citrus’ Bitter, Hardier Cousin
… annotating and analyzing the genome in order to find the genetic traits responsible for  P. trifoliata ’s hardiness, … Fred Gmitter, a UF/IFAS professor of citrus breeding genetics and longtime JGI collaborator, are senior authors … Journal.  this study included the discovery of candidate genes that confer resistance to citrus greening disease. …
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Mindfully Moving JGI
… labs in one long building at Walnut Creek, after countless generations of sequencing platforms (up to 120 sequencing … unneeded Lab tagged equipment, recyclables, and general waste that would actually go to the landfill. … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …
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Toward More Efficient Artificial Photosynthesis
… a platform that mimics chloroplast function within a cell-sized system. The Impact Photosynthesis harnesses carbon captured from the atmosphere in a process that generates energy. The MPI team ultimately aims to develop an … lab through the CSP Functional Genomics call, the JGI synthesized library of genes that code for Enoyl-CoA …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… understanding which microbes are present in a sample, to generate data about which organisms are active, and which … process to carry out the onerous SIP sample processing. Generating these datasets opens up the possibility of new … They found that although 20 years of SIP experiments have generated plenty of insights, many studies don’t report the …
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Eelgrass Proves to Be Much Younger Than We Thought
… a timeline like this, researchers would normally craft a genetic clock based on its divergence with a  different … researchers to use the genome assembly to calibrate their genetic clock.  Various researchers around the globe were … in various locations.  One group investigated changes in protein sequences, while others analyzed single point …
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Building Sphagnum Genomic Resources
… soil carbon. In high latitudes, sphagnum can also act as a protective layer insulating permafrost from the warming … and evolutionary genomics .” Understanding the nature and genetic basis of functional traits in sphagnum growth and … species encode a sulfate reduction pathway, but also have genes for sulfide oxidation. The findings lead them to …
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