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… her study of microbes in California’s manmade water transport canals. “This award allows me to work directly with Dr … to study microbial communities from sediment samples across spatial and temporal scales. Rambo also plans to work with … at a larger scale may be applicable towards carbon, and especially methane, budgets in the face of climate …

… mushroom genomes, and assembling genomes from 60 existing sequences, this work expands the family tree for Lentinula. … it into their own carbon-rich structures, as well as atmospheric carbon dioxide.  Summary Researchers sequenced 11 samples from Asia–Australasia and 13 samples …

… was partly enabled by a JGI Community Science Program (CSP) proposal led by INRAE’s Francis Martin that contributed … a mycobiome culture collection consisting of fungal species from natural Arabidopsis populations around Europe. The JGI sequenced and annotated 41 fungal isolates from the …

… we’re highlighting genomic science research that feels especially relevant to living on a changing planet. … Department of Energy Joint Genome Institute, or JGI.  Two special days occur in April: the 50th celebration of Earth … some scintillating genomic science research that feels especially relevant to living on a changing planet. In this …

… everyday activities, striving for sustainability in lab spaces as well as offices. These efforts dovetail into … of materials used — from their creation to their disposal.  To minimize emissions from the disposal end of that lifecycle, there’s a specific push going …

… microbes found in the oil plume from Deepwater Horizon oil spill led to a draft genome of the first deep-sea, … cell (seen here in a glass capillary), researchers sequenced and assembled the first complete genome of an …

… Flux Balance analysis with metabolites, Isotope Ratio Mass Spectrometry, NanoSIMS, and other techniques. Q&A from the … for enrichment? A:  The JGI uses liquid chromatography–mass spectrometry (LCMS).  We do a hydrolyzation of the DNA and … with the laser ablation IRMS so we don’t quite have the spatial resolution at tens of microns or 100 microns, …

… fungi The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial … energy . Summary Arbuscular mycorrhizal fungi, the most widespread type of mycorrhizal fungi, live within a plant’s root … to it. The isotopes are incorporated into the DNA of specific microbes who consume the labeled food or water. …

… more about PhycoCosm, the largest interactive collection of sequenced algal genomes, omics data and comparative analysis …

… Despite their diminutive stature, “short plants” such as … uniquely powerful in helping scientists link plant genetic sequences to what they do. But sequencing the genome of one …

… to browse and search through the more than 2 million viral sequences available in IMG/VR v3. …

… genomics research as part of the Metagenome Program. His responsibilities include the development of novel computational tools to identify virus sequences, the design of new experimental approaches to link …