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… Sequence-based studies — from metagenomics to single-cell … of these approaches. One way of detecting giant viruses in sequence data is read-mapping: using giant virus reference …

… the research consortium aims to generate over a terabase of sequence. “We are thrilled to support this year’s CSP …

… with a view to developing a deeper understanding of sequence-based gene function. … tool for targeted and genome-scale gRNA design and sequence extraction for prokaryotes and eukaryotes. …

… Ec YcgR, within the Nano-lantern scaffold. They then mined sequence databases for homologous YcgR proteins and chose a … These 92 homologues were synthesized as codon optimized sequences and cloned into the Nano-lantern scaffold. Because …

… the process hinges on referencing to existing genome sequences.  Some of these proteins are what the scientists … artificial intelligence to decode the language of protein sequences and obtain hints of their possible functions. Yet … efforts were limited to the realm of already-known protein sequences.  “In this endeavor, we have not only ventured …

… Schmutz is the Plant Program Lead at the JGI. Sarah:  Why is a resource like this important to the field of plant …

… genomes of uncultivated giant viruses from environmental sequences across the globe, then using these sequences to make inferences about the biogeographic … giant virus genomes reconstructed from environmental sequences is still challenging and even with this study we …

… community able to not just analyze but also create DNA sequences mimicking an array of microbial life. By … is capable of discovering and modelling complex biological sequences such as biosynthetic gene cluster structures. … to predict the biological meaning and relevance of new sequences. It can generate novel sequences based on the …

… of millions of trees in California alone. With the genome sequence in hand, the UC team led the charge to develop … Publication: Tyler BM et al. Phytophthora genome sequences uncover evolutionary origins and mechanisms of …

… under laboratory conditions, their genomes can’t be sequenced using traditional approaches. Identifying and … of metagenome-assembled genomes (MAGs) directly from sequenced environmental samples without needing to cultivate … – that’s pretty remarkable.” Adding Value Beyond Genome Sequences Much of the data had been generated from …

… than previously suspected. “That would cause significant consequences on the entire food web, and therefore ecosystem … After isolating the algal communities on filters, they sequenced DNA ‘marker’ gene sequences to identify the microbes. And in order to …