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Eelgrass Proves to Be Much Younger Than We Thought
… duplication event — bioinformatics expertise, as well as sequencing for all global populations of eelgrass used in … US Department of Energy Joint Genome Institute Community Sequencing Program (CSP 502951, 2016, Population and …
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Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica DSM16522, Xenorhabdus koppenhoeferii DSM18168, and Xenorhabdus mauleonii DSM17908
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Igor Grigoriev
… Miyauchi et al (2020) Large-scale genome sequencing of mycorrhizal fungi provides insights into the …
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An Integrated Dataset to Understand Ecosystem Interaction
… generated is 25 terabytes in size. Resources for genomic sequencing, analysis and characterization were provided by …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… reference genome built off more than a decade of work; as sequencing technologies advanced, assembly and annotation of …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… processing these sturdy materials, rumen microbes and their enzymes are an optimal study subject that could lead to more … involved in the digestion process.  “We wanted to find the enzymes that make the rumen such an efficient … “The ultimate target has shifted from just finding enzymes that produce biofuel, to the general ability of …
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A Complex Confection Decoded: Sugarcane Reference Genome
… sugarcane was published as a step forward in this effort. Sequencing and assembling the genome required a custom …
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Ian Blaby
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Viruses Reprogram Cells into Different Virocells
… in one proposed research project. For this project, RNA sequencing was done by the JGI, and proteomics and …
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Boosting Small Molecule Production in Super “Soup”
… components of lysed cells. By separating the production of enzymes (during growth) and the biochemical production … to accelerate bio-design and identifying the best sets of enzymes that enable synthesis of sustainable chemical … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… or clinical isolates. As cyclic di-GMP also regulates enzymes involved in cellulose production in microbes, these … Chemiluminescent biosensors typically use luciferases, enzymes that drive oxidative reactions to produce light. … to develop a high-throughput, lysate-based assay to screen enzymes for cyclic di-GMP synthesis activity. Ultimately, …
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Methane Makers in Yosemite’s Lakes
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