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Tanja Woyke Elected to American Academy of Microbiology
… Tanja Woyke , who has been elected to the American Academy of Microbiology (AAM) ! She is among the 68 new Fellows in the Class of 2020, selected from 118 nominees. The … from previously understudied clades, establishing their evolutionary relationships and leading to the discovery of …
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SIPs with Standards
… Stable Isotope Probing (SIP) is a powerful technique for studying microbial … SIP labwork and analysis can be very demanding.  The JGI offers SIP analysis to make these experiments accessible to … more reusable, and more insightful, for the future of studying microbial communities.   …
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Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2T) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and
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JGI announces final round of 2022 Functional Genomics awardees
… Twice each year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help translating genomic information into biological function. Through … synthesis and omics capabilities to enhance understanding of gene and genome function.  Below find a list of the final …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… National Ecological Observatory Network (NEON) is a network of field research sites designed to collect long-term open … data to better understand how U.S. ecosystems are changing.  Through the  “Facilities Integrating Collaborations … available for research over 100,000 samples and specimens of over 60 different types of NEON samples and specimens per …
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Mindfully Moving JGI
… JGI is in the process of shifting its operations from Walnut Creek … numbered more than 100 at its peak, all the machines were switched off. Over the next two weeks, they were crated, … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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JGI announces 2024 Functional Genomics awardees
…   Each year, the JGI accepts proposals for state-of-the-art functional genomics research from reseachers who translate genomic information into biological function. Through our CSP … improving crop productivity for bioenergy through enhanced red-light energy capture, enhancing atmospheric carbon …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… This webinar focused on how the JGI employs single-molecule, … to aid with genome assembly and transcriptome analysis of microbial, fungal, and plant research projects.  More … Gb of data per library. Q: How much DNA/coverage is required for DNA modification detection? A:  DNA modification …
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JGI Early Career Researchers Featured in mSystems Special Issue
… In a special issue of mSystems , out May 14, 2019, JGI researchers are among the authors who offer perspectives on what the next five years of innovation … what’s been achieved thus far based on computational predictions, and future directions integrating computational …
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Accelerating Metagenomics Discoveries with Deep Learning
… Berkeley National Laboratory (Berkeley Lab) and other institutions shared their works-in-progress with 86 participants in an … insights from metagenomic data. In deep learning, a branch of machine learning, data is passed through algorithms … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… Analysis reveals the microbial community involved in a bioremediation effort. The Science In 1999, the Environmental Protection Agency declared the North Railroad Avenue Plume (NRAP) a Superfund site. … PCE (perchloroethylene) found its way into the groundwater of several communities in New Mexico via leakage from a …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … engineering of biofuels. Since 2010, the JGI has partnered with researchers around the world to map out genomes of …
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